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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 49
First Previous 1-49 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_7015_a02f 2012 5' Callus 716bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 484 1.28523e-134
whcs_16013_c01f 2012 5' Callus 628bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 424 1.1733e-116
whcs_2013_c01f 2012 5' Callus 575bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 371 7.10783e-101
whdl_1021_i02f 2012 5' Crown of seedling 315bp Contig36557       elongationfactor1-alpha,partial[Verniciafordii] 215 4.48039e-54
whdp_3058_g15f 2012 5' Seed DPA20 214bp Contig36557       elongationfactor1-alpha,partial[Verniciafordii] 147 1.15533e-33
whe_21066_b05f 2012 5' Seed DPA10 432bp Contig36557       elongationfactor1alpha[Arummaculatum] 296 1.54553e-78
whe_9021_f08f 2012 5' Seed DPA10 508bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 341 4.25849e-92
whe_13079_l05f 2012 5' Seed DPA10 432bp Contig36557       elongationfactor1alpha[Arummaculatum] 295 4.51596e-78
whei_11064_a16f 2012 5' Dormant seed with water absorption after breaking 459bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 317 1.10188e-84
whf_16025_c02f 2012 5' Spike at flowering date 487bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 328 4.88319e-88
whh_27002_a19f 2012 5' Spike at heading date 488bp Contig36557       putativeelongationfactor1-alpha[Miscanthussinensis] 330 9.79475e-89
whh_4037_i21f 2012 5' Spike at heading date 467bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 320 1.32506e-85
whhg_19046_d12f 2012 5' Anther at meiosis of MT4B CS wheat 665bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 455 7.17895e-126
whms_19048_b11f 2012 5' Seed DPA5 of DT3DL CS wheat 758bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 482 4.25779e-134
whms_18023_i06f 2012 5' Seed DPA5 of DT3DL CS wheat 734bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 468 1.00977e-129
whms_19053_k13f 2012 5' Seed DPA5 of DT3DL CS wheat 757bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 482 4.22076e-134
whok_1091_e22f 2012 5' Seed DPA5 668bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 452 3.6043e-125
whr_14043_g09f 2012 5' Root 534bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 354 7.1991e-96
whr_3006_j13f 2012 5' Root 431bp Contig36557       putativeelongationfactor1-alpha[Miscanthussinensis] 278 5.7127e-73
whr_19080_p11f 2012 5' Root 443bp Contig36557       elongationfactor1alpha[Arummaculatum] 304 9.86477e-81
whsd_16042_h12f 2012 5' Shoot grown with dessication 584bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 395 4.83424e-108
whsl_19001_a19f 2012 5' Seed DPA30 435bp Contig36557       elongationfactor1alpha[Arummaculatum] 296 1.54553e-78
whsl_11009_c13f 2012 5' Seed DPA30 393bp Contig36557       putativeelongationfactor1-alpha[Miscanthussinensis] 259 3.54524e-67
whsl_19053_i22f 2012 5' Seed DPA30 510bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 339 1.61069e-91
whsl_12094_k18f 2012 5' Seed DPA30 434bp Contig36557       elongationfactor1alpha[Arummaculatum] 296 1.54553e-78
whsl_24093_k24f 2012 5' Seed DPA30 522bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 352 2.49777e-95
whsl_14097_n06f 2012 5' Seed DPA30 476bp Contig36557       elongationfactor1alpha[Arummaculatum] 323 1.18254e-86
whsl_22040_n15f 2012 5' Seed DPA30 244bp Contig36557       elongationfactor1-alpha,partial[Verniciafordii] 170 1.27605e-40
whsp_15032_b07f 2012 5' 512bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 341 4.21885e-92
whv3_12092_f24f 2012 5' Shoot grown under cold condition for 3days 146bp Contig36557       elongationfactor1-alpha[Secalecereale] 105 5.19381e-21
whv3_14087_j21f 2012 5' Shoot grown under cold condition for 3days 640bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 396 3.58939e-108
whvd_15080_b19f 2012 5' Shoot grown with dessication 658bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 449 2.91094e-124
whvd_19004_m03f 2012 5' Shoot grown with dessication 199bp Contig36557       elongationfactor1alpha[Arummaculatum] 133 2.28474e-29
whvh_6063_a13f 2012 5' Shoot with heat shock treatment 723bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 457 1.71578e-126
whvs_9072_i19f 2012 5' Liquid cultured tissue 729bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 462 7.10123e-128
whxa_5027_e05f 2012 5' Root 373bp Contig36557       elongationfactor1-alpha,partial[Verniciafordii] 258 4.74277e-67
whxa_5001_o02f 2012 5' Root 404bp Contig36557       putativeelongationfactor1-alpha[Miscanthussinensis] 244 7.0359e-63
whxb_9096_b24f 2012 5' Root 43bp Contig36557       unknown[Medicagotruncatula] 36 1.63658
whxc_23054_k16f 2012 5' Root, treated at 50 microM Al for 6h 405bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 275 3.72211e-72
whxc_13086_l24f 2012 5' Root, treated at 50 microM Al for 6h 360bp Contig36557       elongationfactor1alpha[Arummaculatum] 243 1.55665e-62
whxd_13044_f11f 2012 5' Root, treated at 50 microM Al for 6h 549bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 375 4.34888e-102
whxf_1094_c23f 2012 5' Seedling, infected with leaf rust 44bp Contig36557       elongationfactor1-alpha,partial[Eremospartonsongoricum] 38 0.430679
HX045588 whxm_4072_i19f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 476bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 323 2.01712e-86
HX045589 whxm_5072_i19f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 514bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 349 2.70858e-94
HX049523 whxm_10002_p04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 403bp Contig36557       putativeelongationfactor1-alpha[Miscanthussinensis] 244 7.06476e-63
HX190073 whxu_26010_g04f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 811bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 543 3.03218e-152
whyd_12020_f02f 2012 5' Spikelet at late flowering 530bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 359 2.18926e-97
whyd_2070_j05f 2012 5' Spikelet at late flowering 597bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 365 4.35008e-99
whyd_17048_o15f 2012 5' Spikelet at late flowering 508bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 344 8.54063e-93
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