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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 147
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_1077_d17f 2012 5' Callus 325bp Contig36274       HistoneH3[Medicagotruncatula] 184 1.12911e-44
whcs_1077_d17r 2012 3' Callus 548bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.13246e-70
whcs_17034_p11f 2012 5' Callus 619bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.61528e-70
whdl_16066_b17r 2012 3' Crown of seedling 520bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 4.17481e-50
whdl_2023_m14f 2012 5' Crown of seedling 288bp Contig36274       histonetype2[Loaloa] 160 1.34848e-37
whdl_2024_m14f 2012 5' Crown of seedling 216bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 91 7.47342e-17
whdp_10044_e11f 2012 5' Seed DPA20 560bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.22306e-70
whdp_13087_i21f 2012 5' Seed DPA20 468bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.79514e-43
whdp_13087_i21r 2012 3' Seed DPA20 445bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.5295e-49
whdp_12017_p05f 2012 5' Seed DPA20 549bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.13246e-70
whdp_12017_p06f 2012 5' Seed DPA20 380bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 3.50571e-46
whe_13063_l16f 2012 5' Seed DPA10 530bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 6.63769e-70
whf_28070_j17f 2012 5' Spike at flowering date 526bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 4.11121e-69
whf_26063_o10f 2012 5' Spike at flowering date 507bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 4.28811e-52
whh_7011_d19r 2012 3' Spike at heading date 481bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 1.65801e-56
whh_3084_f18f 2012 5' Spike at heading date 470bp Contig36274       HistoneH3[Medicagotruncatula] 247 8.32057e-64
whh_3084_f18r 2012 3' Spike at heading date 383bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.32686e-45
whhg_1041_g09f 2012 5' Anther at meiosis of MT4B CS wheat 492bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 3.48396e-70
whhg_1041_g09r 2012 3' Anther at meiosis of MT4B CS wheat 605bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.5031e-70
whhg_5041_h10f 2012 5' Anther at meiosis of MT4B CS wheat 671bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.9331e-70
whhg_5041_h10r 2012 3' Anther at meiosis of MT4B CS wheat 612bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.57041e-70
whhg_1089_h22f 2012 5' Anther at meiosis of MT4B CS wheat 600bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.45824e-70
whhg_1089_h22r 2012 3' Anther at meiosis of MT4B CS wheat 586bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.37505e-70
whhg_11004_m04f 2012 5' Anther at meiosis of MT4B CS wheat 601bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.48067e-70
whhg_11004_m04r 2012 3' Anther at meiosis of MT4B CS wheat 522bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 9.55779e-71
whkp_3035_m09r 2012 3' Shoot grown under continuous light 88bp Contig36274       histoneH3,partial[Menthasp.MC-2012] 62 4.9154e-08
whkp_2083_n22f 2012 5' Shoot grown under continuous light 74bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 37 2.14815
whms_1079_b17f 2012 5' Seed DPA5 of DT3DL CS wheat 510bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 9.18859e-71
whms_1079_b17r 2012 3' Seed DPA5 of DT3DL CS wheat 453bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 4.38242e-57
whms_7014_c03f 2012 5' Seed DPA5 of DT3DL CS wheat 602bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.48067e-70
whms_7014_c03r 2012 3' Seed DPA5 of DT3DL CS wheat 562bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.24571e-70
whms_12045_c09f 2012 5' Seed DPA5 of DT3DL CS wheat 636bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.71918e-70
whms_12045_c09r 2012 3' Seed DPA5 of DT3DL CS wheat 552bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.17776e-70
whms_15046_c11f 2012 5' Seed DPA5 of DT3DL CS wheat 626bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.66015e-70
whms_15046_c11r 2012 3' Seed DPA5 of DT3DL CS wheat 537bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.06956e-70
whms_14007_i02f 2012 5' Seed DPA5 of DT3DL CS wheat 314bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000249292
whms_14007_i02r 2012 3' Seed DPA5 of DT3DL CS wheat 260bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 5.52075e-07
whms_19020_n08f 2012 5' Seed DPA5 of DT3DL CS wheat 748bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 2.45445e-70
whms_19020_n08r 2012 3' Seed DPA5 of DT3DL CS wheat 675bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.95532e-70
whoh_21033_a09f 2012 5' Pistil at heading date 510bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 2.50229e-68
whoh_21033_a09r 2012 3' Pistil at heading date 422bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.25415e-51
whoh_15073_c23f 2012 5' Pistil at heading date 524bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.0819e-69
whoh_15073_c23r 2012 3' Pistil at heading date 420bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.64483e-51
whok_7093_d21f 2012 5' Seed DPA5 649bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.78616e-70
whpc_5079_a18f 2012 5' Anther at meiosis 758bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 2.5429e-70
whpc_5079_a18r 2012 3' Anther at meiosis 640bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.7415e-70
whpc_12023_i06f 2012 5' Anther at meiosis 665bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.92012e-70
whpc_5056_i16f 2012 5' Anther at meiosis 750bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 2.47656e-70
whpc_20071_i17f 2012 5' Anther at meiosis 705bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 2.17752e-70
whpc_20071_i17r 2012 3' Anther at meiosis 625bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.66015e-70
whpc_20071_i18f 2012 5' Anther at meiosis 692bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 2.08864e-70
whpc_20071_i18r 2012 3' Anther at meiosis 635bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.69685e-70
whpc_1072_i20f 2012 5' Anther at meiosis 677bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.97754e-70
whpc_9052_m15f 2012 5' Anther at meiosis 656bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.85314e-70
whr_3013_k01r 2012 3' Root 76bp Contig36274       hypotheticalproteinOsI_04556[OryzasativaIndicaGroup] 60 2.46828e-07
whr_9077_k11f 2012 5' Root 477bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 104 1.12756e-20
whr_9078_k11r 2012 3' Root 366bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 104 1.1154e-20
whr_1049_n21f 2012 5' Root 463bp Contig36274       HistoneH3[Medicagotruncatula] 241 7.65032e-62
whsh_11046_l21f 2012 5' - 230bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0533121
whsh_11046_l21r 2012 3' - 177bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.052152
whsl_29045_k09f 2012 5' Seed DPA30 545bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.10981e-70
whsl_29046_k09r 2012 3' Seed DPA30 124bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0106725
whsl_31078_l11f 2012 5' Seed DPA30 176bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 91 7.51999e-17
whsp_8076_f20f 2012 5' 579bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.58165e-63
whsp_8076_f20r 2012 3' 250bp Contig36274            
whsp_6003_m01f 2012 5' 644bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.76383e-70
whsp_6003_m01r 2012 3' 623bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 6.2233e-70
whsp_3035_m10f 2012 5' 564bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.24571e-70
whvd_11086_k24f 2012 5' Shoot grown with dessication 61bp Contig36274            
whxb_10040_j12f 2012 5' Root 628bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 1.98757e-71
whxb_10040_j12r 2012 3' Root 430bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 1.36921e-50
whxb_35035_n09r 2012 3' Root 65bp Contig36274       hypotheticalproteinOsI_04556[OryzasativaIndicaGroup] 58 7.87875e-07
whxd_18096_a23f 2012 5' Root, treated at 50 microM Al for 6h 480bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 5.86974e-70
whxd_18096_a23r 2012 3' Root, treated at 50 microM Al for 6h 519bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 1.12903e-71
whxe_31057_h14r 2012 3' Seedling, infected with leaf rust 92bp Contig36274       hypotheticalproteinOsI_04556[OryzasativaIndicaGroup] 71 1.05505e-10
whxe_12017_p06r 2012 3' Seedling, infected with leaf rust 586bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 5.68733e-64
whxf_14048_a11r 2012 3' Seedling, infected with leaf rust 649bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.78616e-70
whxf_6081_o21r 2012 3' Seedling, infected with leaf rust 477bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 1.60942e-59
HX000735 whxi_14031_b06f 2012 5' Two-week old seedlings(22℃ 16L-8D) 316bp Contig36274       HistoneH3[Medicagotruncatula] 184 1.10612e-44
HX000748 whxi_14031_b06r 2012 3' Two-week old seedlings(22℃ 16L-8D) 251bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 1.56357e-06
HX002052 whxi_11045_d09f 2012 5' Two-week old seedlings(22℃ 16L-8D) 394bp Contig36274       HistoneH3[Medicagotruncatula] 222 4.80266e-56
HX002553 whxi_3012_e04f 2012 5' Two-week old seedlings(22℃ 16L-8D) 547bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.09302e-69
HX002554 whxi_4012_e04f 2012 5' Two-week old seedlings(22℃ 16L-8D) 543bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 3.24437e-70
HX002555 whxi_5012_e04f 2012 5' Two-week old seedlings(22℃ 16L-8D) 539bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.09232e-70
HX002556 whxi_6012_e04f 2012 5' Two-week old seedlings(22℃ 16L-8D) 536bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 5.30818e-70
HX002568 whxi_3012_e04r 2012 3' Two-week old seedlings(22℃ 16L-8D) 405bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 2.20756e-32
HX002569 whxi_4012_e04r 2012 3' Two-week old seedlings(22℃ 16L-8D) 372bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 2.55423e-28
HX002570 whxi_5012_e04r 2012 3' Two-week old seedlings(22℃ 16L-8D) 403bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 2.21661e-32
HX002571 whxi_6012_e04r 2012 3' Two-week old seedlings(22℃ 16L-8D) 292bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 3.56514e-22
HX003953 whxi_11041_g09f 2012 5' Two-week old seedlings(22℃ 16L-8D) 334bp Contig36274       HistoneH3[Medicagotruncatula] 184 1.12065e-44
HX003969 whxi_11041_g09r 2012 3' Two-week old seedlings(22℃ 16L-8D) 369bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 2.4791e-28
HX006041 whxi_8056_j15f 2012 5' Two-week old seedlings(22℃ 16L-8D) 334bp Contig36274       HistoneH3[Medicagotruncatula] 186 2.94907e-45
HX006054 whxi_8056_j15r 2012 3' Two-week old seedlings(22℃ 16L-8D) 248bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 3.47916e-22
HX008913 whxi_13017_o05f 2012 5' Two-week old seedlings(22℃ 16L-8D) 387bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 5.72268e-41
HX009690 whxi_11034_p12f 2012 5' Two-week old seedlings(22℃ 16L-8D) 451bp Contig36274       HistoneH3[Medicagotruncatula] 262 4.24353e-68
HX012949 whxj_7091_e21r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 211bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 73 3.61652e-11
HX017914 whxj_20067_m18f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 421bp Contig36274       HistoneH3[Medicagotruncatula] 232 3.64057e-59
HX018411 whxj_19051_n14f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 462bp Contig36274       HistoneH3[Medicagotruncatula] 263 1.43945e-68
HX018412 whxj_20051_n14f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 345bp Contig36274       HistoneH3[Medicagotruncatula] 186 3.00678e-45
HX018425 whxj_19051_n14r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 318bp Contig36274       predictedprotein[Hordeumvulgaresubsp.vulgare] 100 1.66027e-19
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