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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 66
First Previous 1-66 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_12014_c03f 2012 5' Callus 109bp Contig3545       PREDICTED:LOWQUALITYPROTEIN:elongationfactor1-gamma-like[Vitisvinifera] 69 4.10784e-10
whcs_13029_c06f 2012 5' Callus 696bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 373 2.31228e-101
whcs_14028_f08f 2012 5' Callus 674bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 370 1.81323e-100
whcs_15009_g01f 2012 5' Callus 682bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 384 1.6208e-104
whcs_14087_j22f 2012 5' Callus 695bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 403 2.72508e-110
whcs_16037_k09f 2012 5' Callus 668bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 370 1.80129e-100
whcs_9004_m04f 2012 5' Callus 657bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 361 1.04256e-97
whcs_9084_m24f 2012 5' Callus 679bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 380 1.77209e-103
whcs_5035_n09f 2012 5' Callus 697bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 384 1.71085e-104
whdl_19004_f07f 2012 5' Crown of seedling 565bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 299 2.5042e-79
whdl_5047_o21f 2012 5' Crown of seedling 363bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 202 3.96148e-50
whdp_8087_i21f 2012 5' Seed DPA20 545bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 329 3.43399e-88
whe_1062_l04f 2012 5' Seed DPA10 553bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 299 2.36761e-79
whe_25015_o13f 2012 5' Seed DPA10 601bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 299 3.88748e-79
whe_6080_p17f 2012 5' Seed DPA10 531bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 271 7.84087e-71
whei_1077_c17f 2012 5' Dormant seed with water absorption after breaking 481bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 274 6.24301e-72
whei_10043_e10f 2012 5' Dormant seed with water absorption after breaking 569bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 307 1.58948e-81
whem_16016_a04f 2012 5' Dormant seed with water absorption 408bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 203 1.37068e-50
whem_14016_b04f 2012 5' Dormant seed with water absorption 181bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 116 3.69961e-24
whem_2040_i11f 2012 5' Dormant seed with water absorption 466bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 287 1.2431e-75
whem_18056_i16f 2012 5' Dormant seed with water absorption 569bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 307 1.58948e-81
whh_14044_h21f 2012 5' Spike at heading date 588bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 301 9.81196e-80
whhg_7066_p19f 2012 5' Anther at meiosis of MT4B CS wheat 676bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 388 8.40325e-106
whkv_17064_a16f 2012 5' Shoot grown with continuous light after cold treatment 689bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 385 5.7563e-105
whkv_17016_b03f 2012 5' Shoot grown with continuous light after cold treatment 661bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 372 4.63126e-101
whms_18079_a17f 2012 5' Seed DPA5 of DT3DL CS wheat 670bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 370 1.80129e-100
whms_11077_c17f 2012 5' Seed DPA5 of DT3DL CS wheat 93bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 65 7.53861e-09
whms_18042_h12f 2012 5' Seed DPA5 of DT3DL CS wheat 677bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 372 4.82588e-101
whms_11002_p03f 2012 5' Seed DPA5 of DT3DL CS wheat 629bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 340 1.72912e-91
whoh_19026_c14f 2012 5' Pistil at heading date 560bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 269 4.64762e-70
whoh_20032_o20f 2012 5' Pistil at heading date 534bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 301 7.3898e-80
whok_17027_f06f 2012 5' Seed DPA5 600bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 319 3.57514e-85
whok_18043_f09f 2012 5' Seed DPA5 710bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 415 9.52702e-114
whsc_1096_b23f 2012 5' Shoot grown with cold treatment 459bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 236 2.47187e-60
whsl_4015_l13f 2012 5' Seed DPA30 368bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 180 1.22467e-43
whsl_12088_m24f 2012 5' Seed DPA30 547bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 264 1.38434e-68
whsl_12064_o16f 2012 5' Seed DPA30 600bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 297 1.11395e-78
whsp_10071_j17f 2012 5' 600bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 340 1.49857e-91
whsp_12006_l04f 2012 5' 490bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 297 1.20011e-78
whsp_4022_l07f 2012 5' 607bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 321 9.8425e-86
whvh_17010_g03f 2012 5' Shoot with heat shock treatment 669bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 370 1.80129e-100
whvs_4093_d22f 2012 5' Liquid cultured tissue 89bp Contig3545       hypotheticalproteinSORBIDRAFT_10g022570[Sorghumbicolor] 62 6.41971e-08
whvs_18060_e16f 2012 5' Liquid cultured tissue 699bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 384 1.72885e-104
whvs_9057_h13f 2012 5' Liquid cultured tissue 682bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 384 1.6208e-104
whxa_29077_c18f 2012 5' Root 407bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 232 2.75544e-59
whxa_17087_j21f 2012 5' Root 204bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 128 5.59059e-28
whxb_9029_c06f 2012 5' Root 595bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 315 6.7747e-84
whxb_24090_h24f 2012 5' Root 634bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 342 4.52855e-92
whxb_23085_l22f 2012 5' Root 633bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 342 4.52855e-92
whxc_8086_k23f 2012 5' Root, treated at 50 microM Al for 6h 600bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 319 3.57514e-85
whxc_30001_o02f 2012 5' Root, treated at 50 microM Al for 6h 368bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 216 2.01397e-54
whxc_14082_p23f 2012 5' Root, treated at 50 microM Al for 6h 583bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 327 1.21763e-87
whxd_17075_e17f 2012 5' Root, treated at 50 microM Al for 6h 122bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 85 7.14729e-15
whxd_30028_f07f 2012 5' Root, treated at 50 microM Al for 6h 397bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 222 2.88666e-56
whxf_30047_a09f 2012 5' Seedling, infected with leaf rust 603bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 353 1.73694e-95
HX025368 whxk_10040_i11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 404bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 214 1.01834e-53
HX025380 whxk_9040_i11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 396bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 214 1.03087e-53
HX025852 whxk_7008_j04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 358bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 174 1.1598e-41
HX048356 whxm_11019_n06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 369bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 188 7.67086e-46
HX135338 whxr_10088_i24f 2012 5' Roots, 18 day old plants were grown hydroponically 662bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 372 4.63126e-101
HX184407 whxu_3047_b10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 684bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 385 5.63251e-105
HX194025 whxu_14055_j13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 700bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 393 2.18194e-107
whxv_10053_k14f 2012 5' Leaves, plant was grown at constant 23 661bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 372 4.63126e-101
whyd_24051_e10f 2012 5' Spikelet at late flowering 556bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 299 4.11619e-79
whyd_26023_m02f 2012 5' Spikelet at late flowering 571bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 292 3.15745e-77
whyd_26007_m13f 2012 5' Spikelet at late flowering 215bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 135 4.52809e-30
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