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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 58
First Previous 1-58 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_14076_h05f 2012 5' Crown of seedling 594bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 416 2.77665e-114
whdl_14076_h05r 2012 3' Crown of seedling 621bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.50911e-95
whdp_6010_g04f 2012 5' Seed DPA20 132bp Contig35211            
whdp_6010_g04r 2012 3' Seed DPA20 107bp Contig35211            
whms_1065_o18f 2012 5' Seed DPA5 of DT3DL CS wheat 239bp Contig35211       PREDICTED:LMBR1domain-containingprotein2homologA-like[Brachypodiumdistachyon] 39 0.446738
whms_1065_o18r 2012 3' Seed DPA5 of DT3DL CS wheat 189bp Contig35211       PREDICTED:selenium-bindingprotein1-like[Brachypodiumdistachyon] 57 1.60896e-06
whoh_13090_d06f 2012 5' Pistil at heading date 513bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 3.01643e-98
whoh_13090_d06r 2012 3' Pistil at heading date 548bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.33464e-79
whr_13004_e13f 2012 5' Root 418bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 300 1.0931e-79
whsd_10082_p23f 2012 5' Shoot grown with dessication 566bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 403 1.25373e-110
whsd_10082_p23r 2012 3' Shoot grown with dessication 587bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.10225e-83
whva_12058_h15f 2012 5' Shoot with ABA treatment 669bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 454 9.48502e-126
whva_12058_h15r 2012 3' Shoot with ABA treatment 650bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 6.15828e-103
whva_12058_h16r 2012 3' Shoot with ABA treatment 488bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 1.08797e-71
whxd_19047_a10r 2012 3' Root, treated at 50 microM Al for 6h 670bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 1.16756e-99
whxe_7080_b20f 2012 5' Seedling, infected with leaf rust 317bp Contig35211       PREDICTED:selenium-bindingprotein1-like[Brachypodiumdistachyon] 227 1.53605e-57
whxe_7080_b20r 2012 3' Seedling, infected with leaf rust 344bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 5.64431e-60
whxe_3046_d11f 2012 5' Seedling, infected with leaf rust 612bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 1.38074e-119
whxe_3046_d11r 2012 3' Seedling, infected with leaf rust 670bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 3.99354e-100
whxe_13091_f21f 2012 5' Seedling, infected with leaf rust 431bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.6475e-78
whxe_14091_f21f 2012 5' Seedling, infected with leaf rust 454bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 7.96592e-83
whxe_15091_f21f 2012 5' Seedling, infected with leaf rust 173bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 119 4.41253e-25
whxe_13091_f21r 2012 3' Seedling, infected with leaf rust 560bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 5.29295e-82
whxe_14091_f21r 2012 3' Seedling, infected with leaf rust 573bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 1.94465e-82
whxe_29019_m06f 2012 5' Seedling, infected with leaf rust 375bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 264 6.59182e-69
whxe_22083_n22f 2012 5' Seedling, infected with leaf rust 587bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 404 8.09899e-111
whxe_22083_n22r 2012 3' Seedling, infected with leaf rust 493bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 8.56193e-61
whxf_8076_e20f 2012 5' Seedling, infected with leaf rust 586bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.3592e-110
whxf_8076_e20r 2012 3' Seedling, infected with leaf rust 580bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 2.85648e-81
whxf_14052_n16f 2012 5' Seedling, infected with leaf rust 563bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 400 1.36141e-109
whxf_14052_n16r 2012 3' Seedling, infected with leaf rust 670bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.8758e-98
whxg_29047_b09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 578bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 2.8301e-113
whxg_29047_b09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 272bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.0575e-18
whxg_19091_e21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 444bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 2.58485e-81
whxg_19091_e21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 687bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 5.95684e-102
whxg_31071_j17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 332bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 231 7.99393e-59
whxg_31071_j17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 571bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 295 4.78578e-78
whxh_12038_l11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 572bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 1.77635e-104
whxh_13038_l11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 566bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 4.31903e-103
whxh_12038_l11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 641bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 4.25973e-93
whxh_13038_l11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 562bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 5.04579e-80
HX050226 whxn_33016_a04f 2012 5' Leaves, plant was grown at constant 23 419bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.67281e-43
HX050251 whxn_33016_a04r 2012 3' Leaves, plant was grown at constant 23 441bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 2.53758e-65
HX061175 whxn_21008_i04f 2012 5' Leaves, plant was grown at constant 23 640bp Contig35211       hypotheticalprotein[Triticummonococcumsubsp.aegilopoides] 447 1.75042e-123
HX061205 whxn_21008_i04r 2012 3' Leaves, plant was grown at constant 23 495bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 3.144e-63
HX061575 whxn_31040_i11f 2012 5' Leaves, plant was grown at constant 23 47bp Contig35211       PREDICTED:selenium-bindingprotein1-like[Brachypodiumdistachyon] 34 6.66321
HX080728 whxo_3005_l01f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 665bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 6.11978e-101
HX080747 whxo_3005_l01r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 634bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 392 5.05017e-107
whxv_5080_a19f 2012 5' Leaves, plant was grown at constant 23 714bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 374 1.85462e-101
whxv_5080_a19r 2012 3' Leaves, plant was grown at constant 23 719bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 2.46493e-109
whxv_7046_d12f 2012 5' Leaves, plant was grown at constant 23 730bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 497 1.99196e-138
whxv_7046_d12r 2012 3' Leaves, plant was grown at constant 23 782bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 464 1.26676e-128
whxv_9035_m09r 2012 3' Leaves, plant was grown at constant 23 100bp Contig35211            
whxx_8031_a06r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 163bp Contig35211       PREDICTED:LMBR1domain-containingprotein2homologA-like[Brachypodiumdistachyon] 36 4.95979
whxx_4015_b01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 650bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 432 3.59362e-119
whxx_10021_k05r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 727bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 9.6646e-101
whxy_2078_d20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 375bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 119 4.49087e-25
whxy_2078_d20r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 403bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.51409e-44
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