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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 60
First Previous 1-60 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whok_20065_p17f 2012 5' Seed DPA5 743bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 378 8.28263e-103
whok_20065_p17r 2012 3' Seed DPA5 674bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 367 1.53499e-99
whsh_7001_a01f 2012 5' - 126bp Contig34904            
whsh_7001_a01r 2012 3' - 148bp Contig34904            
whsh_10073_c11f 2012 5' - 73bp Contig34904            
whsh_12060_h04r 2012 3' - 138bp Contig34904            
whsh_18038_j03f 2012 5' - 388bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 138 7.01174e-31
whsh_18038_j03r 2012 3' - 310bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 138 6.98631e-31
whsh_2038_j15r 2012 3' - 165bp Contig34904       ubiquinonebiosynthesisproteinCOQ9[TrichophytonequinumCBS127.97] 37 1.30521
whsh_3006_j19f 2012 5' - 201bp Contig34904            
whsh_3006_j19r 2012 3' - 166bp Contig34904       ubiquinonebiosynthesisproteinCOQ9[TrichophytonequinumCBS127.97] 37 1.69926
whsh_3072_n11f 2012 5' - 244bp Contig34904            
whsh_3072_n11r 2012 3' - 217bp Contig34904            
whvd_3073_h18f 2012 5' Shoot grown with dessication 127bp Contig34904            
whxf_5073_h18r 2012 3' Seedling, infected with leaf rust 57bp Contig34904            
whxf_34049_o14f 2012 5' Seedling, infected with leaf rust 47bp Contig34904       unknown[Lotusjaponicus] 37 0.787101
whxg_31015_b01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 439bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 312 3.52451e-83
whxg_38046_c12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 540bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 388 4.79218e-106
whxg_39046_c12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 547bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 393 1.1584e-107
whxg_16020_n08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 516bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 324 5.47028e-87
whxg_2034_o11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 596bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 385 5.3307e-105
whxg_3034_o11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 598bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 385 5.3307e-105
whxg_3050_o16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 579bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 417 8.94675e-115
whxh_33009_h01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 231bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 166 2.43962e-39
whxh_29023_i05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 503bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 353 1.37899e-95
HX000316 whxi_15063_a14f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 382bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 270 1.19177e-70
HX000317 whxi_16063_a14f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 429bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 268 4.52644e-70
HX000328 whxi_15063_a14r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 316bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 133 2.31135e-29
HX000329 whxi_16063_a14r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 201bp Contig34904       typeIILHCI[Loliumtemulentum] 71 8.16388e-11
HX006204 whxi_10087_j21r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 284bp Contig34904       typeIILHCI[Loliumtemulentum] 113 2.39789e-23
HX028215 whxk_10068_m19r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 349bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 163 2.70502e-38
HX050759 whxn_21063_a13f 2012 5' Leaves, plant was grown at constant 23Ž 317bp Contig34904       typeIILHCI[Loliumtemulentum] 74 1.27418e-11
HX050792 whxn_20063_a13r 2012 3' Leaves, plant was grown at constant 23Ž 295bp Contig34904       typeIILHCI[Loliumtemulentum] 94 1.54445e-17
HX050793 whxn_21063_a13r 2012 3' Leaves, plant was grown at constant 23Ž 276bp Contig34904       typeIILHCI[Loliumtemulentum] 94 1.52163e-17
HX052434 whxn_21079_b18f 2012 5' Leaves, plant was grown at constant 23Ž 533bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 339 1.83497e-91
HX052465 whxn_21079_b18r 2012 3' Leaves, plant was grown at constant 23Ž 564bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 311 8.31707e-83
HX085732 whxp_35079_a18f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 422bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 157 1.13961e-36
HX085760 whxp_35079_a18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 379bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 180 1.24687e-43
HX088405 whxp_37062_c16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 629bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 383 3.36781e-114
HX088437 whxp_37062_c16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 643bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 365 5.26171e-99
HX101714 whxp_38020_m07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 592bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 378 4.83586e-103
HX101740 whxp_38020_m07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 568bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 306 2.72415e-81
HX104852 whxp_35049_o13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 401bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 283 1.37239e-74
HX104874 whxp_35049_o13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 624bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 352 5.66628e-95
HX105550 whxp_35001_p01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 633bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 330 1.7808e-88
HX105573 whxp_35001_p01r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 556bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 300 1.41472e-79
HX113527 whxq_27092_f24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 555bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 353 1.80442e-95
HX113551 whxq_27092_f24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 610bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 363 2.29178e-98
HX115236 whxq_27057_h13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 616bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 248 1.10564e-63
HX115257 whxq_27057_h13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 565bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 240 2.39757e-61
whxw_9023_i05f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 767bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 530 1.80275e-148
whxw_9023_i05r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 690bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 401 7.76185e-110
whxx_8053_k13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 704bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 483 2.79165e-134
whxx_8053_k13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 713bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 420 1.72784e-115
whxx_10003_n01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 755bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 494 1.83083e-137
whxx_10003_n01r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 669bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 385 7.03294e-105
whxy_3011_f01f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 781bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 518 7.39205e-145
whxy_6041_h09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 689bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 346 3.87008e-93
whxy_6070_k20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 675bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 472 3.38802e-131
whxy_6070_k20r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 692bp Contig34904       LHCI-680,photosystemIantennaprotein[Hordeumvulgaresubsp.vulgare] 401 7.84531e-110
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