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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 126
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_8051_e04f 2012 5' Crown of seedling 399bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.2741e-68
whdl_8051_e04r 2012 3' Crown of seedling 481bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 1.70783e-69
whkp_3012_f04f 2012 5' Shoot grown under continuous light 582bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.49191e-77
whkp_3012_f04r 2012 3' Shoot grown under continuous light 516bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 2.22606e-80
whkp_6034_o11f 2012 5' Shoot grown under continuous light 479bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 6.98212e-47
whkp_6034_o11r 2012 3' Shoot grown under continuous light 436bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 1.78066e-50
whsh_3001_a01f 2012 5' - 284bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 3.24085e-20
whsh_3001_a01r 2012 3' - 261bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 1.2242e-22
whsh_16081_a12f 2012 5' - 128bp Contig34291            
whsh_16081_a12r 2012 3' - 84bp Contig34291            
whsh_5049_a16f 2012 5' - 390bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.77895e-42
whsh_5049_a16r 2012 3' - 336bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 1.11218e-44
whsh_5092_d06f 2012 5' - 404bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 7.06861e-47
whsh_5090_d06r 2012 3' - 353bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.52301e-49
whsh_11026_d08f 2012 5' - 566bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.76985e-72
whsh_11026_d08r 2012 3' - 460bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 2.37817e-63
whsh_13003_e13f 2012 5' - 43bp Contig34291            
whsh_15044_h15f 2012 5' - 252bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 5.36148e-15
whsh_15044_h15r 2012 3' - 221bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 6.11882e-22
whsh_1061_k22r 2012 3' - 93bp Contig34291            
whsh_18087_m24f 2012 5' - 112bp Contig34291            
whsh_18087_m24r 2012 3' - 77bp Contig34291            
whsh_17016_p13f 2012 5' - 133bp Contig34291            
whsh_18016_p13f 2012 5' - 160bp Contig34291            
whsh_17016_p13r 2012 3' - 94bp Contig34291            
whsh_18016_p13r 2012 3' - 96bp Contig34291            
whvd_15023_i06f 2012 5' Shoot grown with dessication 399bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 7.12659e-47
whvd_15023_i06r 2012 3' Shoot grown with dessication 355bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 5.23451e-50
whvd_15024_i08f 2012 5' Shoot grown with dessication 390bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 3.82966e-45
whvd_15024_i08r 2012 3' Shoot grown with dessication 365bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 5.15362e-50
whvd_15072_i19f 2012 5' Shoot grown with dessication 365bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 9.74188e-41
whvd_15072_i19r 2012 3' Shoot grown with dessication 199bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 112 4.18713e-23
whvh_20004_m03f 2012 5' Shoot with heat shock treatment 410bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 7.04324e-31
whvh_20004_m03r 2012 3' Shoot with heat shock treatment 367bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.1161e-35
whxf_25026_g08f 2012 5' Seedling, infected with leaf rust 246bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.01813e-13
whxf_25026_g08r 2012 3' Seedling, infected with leaf rust 230bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.44176e-23
whxf_27050_o16f 2012 5' Seedling, infected with leaf rust 268bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.02789e-13
whxg_31009_g01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 410bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.40932e-55
whxg_31009_g01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 431bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.36604e-58
whxg_7088_i23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 380bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 7.80991e-46
whxg_7088_i23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 347bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.25553e-51
whxg_34068_n19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 251bp Contig34291       putativeoxygen-evolvingcomplexprecursor[Triticumaestivum] 167 1.07281e-39
whxg_35068_n19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 196bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 134 1.02894e-29
whxg_34068_n19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 384bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 4.09864e-55
whxg_35068_n19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 347bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.44819e-48
whxg_6050_o16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 270bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.69545e-14
whxh_14048_b12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 53bp Contig34291            
HX025454 whxk_17055_i14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 379bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.34062e-58
HX025455 whxk_18055_i14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 363bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.68324e-54
HX025469 whxk_17055_i14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 209bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 112 4.13237e-23
HX025470 whxk_18055_i14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 211bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 119 3.38049e-25
HX055818 whxn_1027_e06f 2012 5' Leaves, plant was grown at constant 23 205bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 72 4.77042e-11
HX055847 whxn_1027_e06r 2012 3' Leaves, plant was grown at constant 23 192bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 101 1.26895e-19
HX057417 whxn_3043_f10f 2012 5' Leaves, plant was grown at constant 23 69bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.000500749
HX057442 whxn_3043_f10r 2012 3' Leaves, plant was grown at constant 23 545bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 4.05645e-89
HX064922 whxn_23085_k22f 2012 5' Leaves, plant was grown at constant 23 319bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 7.98093e-14
HX064944 whxn_23085_k22r 2012 3' Leaves, plant was grown at constant 23 267bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 97 1.8102e-18
HX078673 whxo_1040_i12f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 585bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.95018e-72
HX078682 whxo_2040_i12f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 83bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 4.18569e-07
HX089730 whxp_29062_d15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 234bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.64783e-11
HX089761 whxp_29062_d15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 205bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 3.28512e-20
HX093181 whxp_25009_g02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 367bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.83003e-39
HX103613 whxp_17052_n16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 232bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 72 4.81071e-11
HX103643 whxp_17052_n16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 205bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 3.28512e-20
HX117923 whxq_12088_j24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 73bp Contig34291            
HX117946 whxq_12088_j24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 40bp Contig34291            
HX145968 whxs_15096_b23f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 761bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 3.53791e-112
HX145993 whxs_15096_b23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 729bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.28969e-118
HX182401 whxt_8050_p16f 2012 5' Roots, 18 day old plants were grown hydroponically 764bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 3.52072e-112
HX182425 whxt_8050_p16r 2012 3' Roots, 18 day old plants were grown hydroponically 741bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.39872e-118
whxv_10093_d21f 2012 5' Leaves, plant was grown at constant 23 699bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.74739e-118
whxv_10093_d21r 2012 3' Leaves, plant was grown at constant 23 740bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.37692e-118
whxv_3012_f03f 2012 5' Leaves, plant was grown at constant 23 721bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.13086e-108
whxv_3012_f03r 2012 3' Leaves, plant was grown at constant 23 741bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.39872e-118
whxv_10028_f08f 2012 5' Leaves, plant was grown at constant 23 782bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 2.09772e-115
whxv_10028_f08r 2012 3' Leaves, plant was grown at constant 23 745bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.42053e-118
whxv_10074_g19f 2012 5' Leaves, plant was grown at constant 23 776bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 1.29239e-117
whxv_10074_g19r 2012 3' Leaves, plant was grown at constant 23 801bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.77768e-118
whxv_8089_g22r 2012 3' Leaves, plant was grown at constant 23 735bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 3.07587e-118
whxv_4007_j02f 2012 5' Leaves, plant was grown at constant 23 788bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 2.13211e-115
whxv_4007_j02r 2012 3' Leaves, plant was grown at constant 23 810bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 1.42163e-117
whxv_6024_j07f 2012 5' Leaves, plant was grown at constant 23 508bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.41696e-65
whxv_6024_j07r 2012 3' Leaves, plant was grown at constant 23 453bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 6.99469e-71
whxv_1054_k16f 2012 5' Leaves, plant was grown at constant 23 739bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 3.29392e-112
whxv_1054_k16r 2012 3' Leaves, plant was grown at constant 23 739bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.37692e-118
whxv_3086_k24f 2012 5' Leaves, plant was grown at constant 23 798bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 1.37855e-117
whxv_3086_k24r 2012 3' Leaves, plant was grown at constant 23 755bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 1.4574e-118
whxv_6006_l03f 2012 5' Leaves, plant was grown at constant 23 763bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 1.99456e-115
whxv_6006_l03r 2012 3' Leaves, plant was grown at constant 23 113bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 6.75069e-13
whxv_6053_l13f 2012 5' Leaves, plant was grown at constant 23 750bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 3.41591e-112
whxv_6053_l13r 2012 3' Leaves, plant was grown at constant 23 731bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.3115e-118
whxv_3067_m18f 2012 5' Leaves, plant was grown at constant 23 70bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 7.72544e-05
whxv_3067_m18r 2012 3' Leaves, plant was grown at constant 23 732bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.3115e-118
whxv_8051_n13f 2012 5' Leaves, plant was grown at constant 23 785bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 9.82417e-113
whxv_8051_n13r 2012 3' Leaves, plant was grown at constant 23 778bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.62578e-118
whxx_1047_a09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 795bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 421 1.65883e-115
whxx_1047_a09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 745bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 1.40626e-118
whxx_7053_l13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 678bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 7.17795e-113
whxx_7053_l13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 731bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.3115e-118
whxx_1070_l20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 792bp Contig34291       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 9.98391e-113
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