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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 80
First Previous 1-80 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9049_o13f 2012 5' Callus 275bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 81 1.33301e-13
whei_6075_f17f 2012 5' Dormant seed with water absorption after breaking 476bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.10161e-67
whei_6075_f18f 2012 5' Dormant seed with water absorption after breaking 475bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.10161e-67
whei_6075_f18r 2012 3' Dormant seed with water absorption after breaking 547bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 7.59613e-67
whei_8053_k13f 2012 5' Dormant seed with water absorption after breaking 522bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.56365e-67
whei_8053_k13r 2012 3' Dormant seed with water absorption after breaking 554bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 247 1.82124e-63
whei_15053_k14f 2012 5' Dormant seed with water absorption after breaking 520bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.44127e-67
whei_15053_k14r 2012 3' Dormant seed with water absorption after breaking 574bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 8.76972e-67
whei_14050_o15f 2012 5' Dormant seed with water absorption after breaking 502bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.03738e-67
whei_14050_o15r 2012 3' Dormant seed with water absorption after breaking 604bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.00823e-66
whei_11066_o19f 2012 5' Dormant seed with water absorption after breaking 40bp Contig34211            
whem_6076_e19r 2012 3' Dormant seed with water absorption 416bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 139 4.09499e-31
whem_20028_f07f 2012 5' Dormant seed with water absorption 531bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.86894e-67
whem_20028_f07r 2012 3' Dormant seed with water absorption 613bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.05337e-66
whem_12041_h09f 2012 5' Dormant seed with water absorption 353bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 133 1.75065e-29
whem_12041_h09r 2012 3' Dormant seed with water absorption 438bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 156 3.24634e-36
whem_8033_p10f 2012 5' Dormant seed with water absorption 492bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.12168e-67
whem_8033_p10r 2012 3' Dormant seed with water absorption 582bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 9.22332e-67
whh_26003_b13f 2012 5' Spike at heading date 453bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 131 6.62319e-29
whoh_3001_a01f 2012 5' Pistil at heading date 197bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 119 3.42529e-25
whoh_4002_a01f 2012 5' Pistil at heading date 456bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 125 6.17215e-27
whoh_3001_a01r 2012 3' Pistil at heading date 176bp Contig34211       60SribosomalproteinL27C[Heveabrasiliensis] 42 0.0683317
whok_15052_m15f 2012 5' Seed DPA5 227bp Contig34211       hypotheticalproteinPGTG_03030[Pucciniagraminisf.sp.triticiCRL75-36-700-3] 35 6.53899
whrd_11042_g12f 2012 5' Root of dessiccated seed 667bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.30292e-66
whrd_11042_g12r 2012 3' Root of dessiccated seed 616bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.06842e-66
whsc_6072_i20f 2012 5' Shoot grown with cold treatment 519bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.44127e-67
whsc_6072_i20r 2012 3' Shoot grown with cold treatment 603bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 253 2.44628e-65
whsd_13090_h24f 2012 5' Shoot grown with dessication 521bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 240 1.80671e-61
whsd_13090_h24r 2012 3' Shoot grown with dessication 575bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 8.76972e-67
whsl_8001_a07f 2012 5' Seed DPA30 261bp Contig34211       60SribosomalproteinL27[Arabidopsislyratasubsp.lyrata] 49 0.000437435
whsl_4093_h18f 2012 5' Seed DPA30 445bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 125 6.25306e-27
whsl_4092_h18r 2012 3' Seed DPA30 372bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 131 1.14202e-28
whsl_12038_i09f 2012 5' Seed DPA30 231bp Contig34211            
whsl_12038_i09r 2012 3' Seed DPA30 208bp Contig34211       ribosomalproteinL27homolog[Pisumsativum] 46 0.00278473
whxa_19027_e05f 2012 5' Root 623bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.09851e-66
whxa_19027_e05r 2012 3' Root 545bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 234 1.50344e-59
whxa_6011_f01f 2012 5' Root 332bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 203 2.33128e-50
whxa_6011_f01r 2012 3' Root 606bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.02327e-66
whxa_27088_j23f 2012 5' Root 677bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.32646e-66
whxa_27088_j23r 2012 3' Root 628bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 254 1.60798e-65
whxa_13018_p07f 2012 5' Root 295bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 182 3.3018e-44
whxa_13018_p07r 2012 3' Root 297bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 90 2.21408e-16
whxb_37032_b08r 2012 3' Root 626bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.11356e-66
whxb_16095_b21r 2012 3' Root 48bp Contig34211       60SribosomalproteinL27[Arabidopsislyratasubsp.lyrata] 37 1.34259
whxb_21045_d09f 2012 5' Root 654bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.24302e-66
whxb_23045_d09f 2012 5' Root 636bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.13818e-66
whxb_21045_d09r 2012 3' Root 621bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.09851e-66
whxb_23045_d09r 2012 3' Root 636bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 254 1.66516e-65
whxb_23026_h07f 2012 5' Root 318bp Contig34211       60SribosomalproteinL27[Arabidopsislyratasubsp.lyrata] 49 0.000438945
whxb_23026_h07r 2012 3' Root 297bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 68 1.18101e-09
whxb_23037_l10f 2012 5' Root 636bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.13818e-66
whxb_23037_l10r 2012 3' Root 601bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 254 1.43415e-65
whxb_20020_m07f 2012 5' Root 324bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 197 1.2937e-48
whxb_20020_m07r 2012 3' Root 479bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 230 1.03851e-58
whxb_37084_m23r 2012 3' Root 613bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.05337e-66
whxc_16072_i20r 2012 3' Root, treated at 50 microM Al for 6h 422bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 173 2.00693e-41
whxc_11068_m19f 2012 5' Root, treated at 50 microM Al for 6h 606bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 228 1.11731e-57
whxc_9068_m19f 2012 5' Root, treated at 50 microM Al for 6h 643bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 242 5.14388e-62
whxc_11068_m19r 2012 3' Root, treated at 50 microM Al for 6h 575bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 247 2.02175e-63
whxc_9068_m19r 2012 3' Root, treated at 50 microM Al for 6h 599bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 252 5.36718e-65
whxd_12016_a03r 2012 3' Root, treated at 50 microM Al for 6h 216bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 111 9.14497e-23
whxd_34035_n09f 2012 5' Root, treated at 50 microM Al for 6h 630bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.12321e-66
whxd_35035_n09f 2012 5' Root, treated at 50 microM Al for 6h 78bp Contig34211            
whxd_34035_n09r 2012 3' Root, treated at 50 microM Al for 6h 431bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 173 1.98173e-41
whxe_9043_e10f 2012 5' Seedling, infected with leaf rust 665bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.28794e-66
whxe_9043_e10r 2012 3' Seedling, infected with leaf rust 659bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.25799e-66
whxg_10046_d11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 382bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 90 1.69696e-16
whxg_11046_d11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 384bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 92 5.80913e-17
whxg_22068_m19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 416bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 114 1.4107e-23
whxg_22068_m19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 407bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 123 3.07489e-26
HX025204 whxk_17023_i05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 140bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 95 6.78066e-18
HX069687 whxn_25033_o10f 2012 5' Leaves, plant was grown at constant 23 524bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 240 1.84972e-61
HX069716 whxn_25033_o10r 2012 3' Leaves, plant was grown at constant 23 506bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 6.19218e-67
HX173626 whxt_30055_i13f 2012 5' Roots, 18 day old plants were grown hydroponically 618bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.08347e-66
HX173653 whxt_30055_i13r 2012 3' Roots, 18 day old plants were grown hydroponically 610bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.03832e-66
HX179646 whxt_6036_n11f 2012 5' Roots, 18 day old plants were grown hydroponically 649bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 256 3.4859e-66
HX179669 whxt_6036_n11r 2012 3' Roots, 18 day old plants were grown hydroponically 625bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 256 3.23997e-66
HX201256 whxu_16049_p14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 298bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 77 1.93963e-12
whxw_6082_o24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 672bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.31156e-66
whxw_6082_o24r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 638bp Contig34211       PREDICTED:60SribosomalproteinL27-3-like[Brachypodiumdistachyon] 258 1.15316e-66
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