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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 23
First Previous 1-23 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_22033_a03r 2012 3' Crown of seedling 360bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 59 4.1473e-07
whdp_4060_e15f 2012 5' Seed DPA20 543bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 227 1.08255e-57
whdp_4060_e15r 2012 3' Seed DPA20 530bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 251 8.3967e-65
whe_22092_g18r 2012 3' Seed DPA10 586bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 289 2.90741e-76
whei_19016_a03f 2012 5' Dormant seed with water absorption after breaking 497bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 288 4.21016e-76
whei_19016_a03r 2012 3' Dormant seed with water absorption after breaking 624bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 308 9.38325e-82
whei_13029_c05r 2012 3' Dormant seed with water absorption after breaking 618bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 325 7.2171e-87
whsh_18002_b01f 2012 5' - 122bp Contig339            
whsh_18002_b01r 2012 3' - 100bp Contig339            
whxb_2022_k07f 2012 5' Root 141bp Contig339            
whxb_3022_k07f 2012 5' Root 140bp Contig339            
whxb_2022_k07r 2012 3' Root 111bp Contig339            
whxb_3022_k07r 2012 3' Root 111bp Contig339            
whxb_6085_l22f 2012 5' Root 429bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 131 8.63607e-29
whxb_6085_l22r 2012 3' Root 287bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 86 3.24365e-15
HX004536 whxi_10026_h07f 2012 5' Two-week old seedlings(22℃ 16L-8D) 203bp Contig339            
HX004550 whxi_10026_h07r 2012 3' Two-week old seedlings(22℃ 16L-8D) 188bp Contig339       unknown[Zeamays] 41 0.091659
HX068847 whxn_36068_n19f 2012 5' Leaves, plant was grown at constant 23℃ 650bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 292 4.44414e-77
HX068877 whxn_36068_n19r 2012 3' Leaves, plant was grown at constant 23℃ 633bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 319 4.16015e-85
HX069938 whxn_21049_o14r 2012 3' Leaves, plant was grown at constant 23℃ 579bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 315 4.70839e-84
HX139626 whxr_4036_m12r 2012 3' Roots, 18 day old plants were grown hydroponically 655bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 325 8.27987e-87
HX193804 whxu_15024_j08r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 657bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 325 8.27987e-87
whxx_4044_f12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 677bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 325 8.8357e-87
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