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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 113
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_18033_p10f 2012 5' Callus 549bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 4.92366e-66
whcs_18033_p10r 2012 3' Callus 490bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 1.91171e-68
whdl_18058_d04f 2012 5' Crown of seedling 546bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.53057e-67
whe_13092_g12f 2012 5' Seed DPA10 498bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 3.94974e-66
whe_13091_g12r 2012 3' Seed DPA10 185bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.50521e-28
whe_14091_g12r 2012 3' Seed DPA10 185bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.50521e-28
whei_13061_c14f 2012 5' Dormant seed with water absorption after breaking 74bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 56 4.46878e-06
whf_9075_d05f 2012 5' Spike at flowering date 512bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.04882e-58
whf_9075_whr_d05r 2012 3' 485bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.29402e-64
whkp_20096_a24f 2012 5' Shoot grown under continuous light 498bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 188 5.92955e-46
whkp_20096_a24r 2012 3' Shoot grown under continuous light 483bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 215 4.61313e-54
whkp_3068_n19f 2012 5' Shoot grown under continuous light 541bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.52774e-64
whkp_3068_n19r 2012 3' Shoot grown under continuous light 510bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.76661e-67
whms_8005_k01f 2012 5' Seed DPA5 of DT3DL CS wheat 615bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 2.08515e-62
whms_8005_k01r 2012 3' Seed DPA5 of DT3DL CS wheat 586bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.38736e-68
whms_1038_k12f 2012 5' Seed DPA5 of DT3DL CS wheat 540bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.24977e-66
whms_1038_k12r 2012 3' Seed DPA5 of DT3DL CS wheat 504bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.18102e-68
whms_5053_l14f 2012 5' Seed DPA5 of DT3DL CS wheat 544bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.26979e-66
whms_5053_l14r 2012 3' Seed DPA5 of DT3DL CS wheat 478bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.80465e-69
whok_2058_h15f 2012 5' Seed DPA5 554bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.12061e-66
whok_2058_h15r 2012 3' Seed DPA5 515bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.35364e-69
whpc_12021_l06f 2012 5' Anther at meiosis 545bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.26979e-66
whpc_12021_l06r 2012 3' Anther at meiosis 470bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.76347e-67
whpc_12069_l17f 2012 5' Anther at meiosis 524bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.28097e-62
whpc_12069_l17r 2012 3' Anther at meiosis 508bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.76661e-67
whpc_12069_l18f 2012 5' Anther at meiosis 536bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.49592e-64
whpc_12069_l18r 2012 3' Anther at meiosis 504bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.71006e-67
whr_10083_b06r 2012 3' Root 332bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 160 1.73292e-37
whr_10083_b12r 2012 3' Root 298bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 160 1.74215e-37
whr_15047_o21f 2012 5' Root 548bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.40975e-67
whr_15047_o21r 2012 3' Root 498bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.73528e-67
whsc_8036_n12f 2012 5' Shoot grown with cold treatment 224bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.5503e-36
whsc_8036_n12r 2012 3' Shoot grown with cold treatment 469bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.77576e-67
whsc_1050_o16f 2012 5' Shoot grown with cold treatment 193bp Contig3375            
whsc_1050_o16r 2012 3' Shoot grown with cold treatment 127bp Contig3375            
whsp_13053_l14f 2012 5' 538bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 4.74914e-66
whsp_16053_l14f 2012 5' 520bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.64039e-62
whsp_16053_l14r 2012 3' 535bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 2.38274e-70
whvs_6045_c09f 2012 5' Liquid cultured tissue 518bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 2.21897e-59
whvs_6045_c09r 2012 3' Liquid cultured tissue 457bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.26658e-64
whvs_12056_i15f 2012 5' Liquid cultured tissue 178bp Contig3375            
whxb_24047_b10f 2012 5' Root 514bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.04882e-58
whxb_24047_b10r 2012 3' Root 510bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.76661e-67
whxb_3046_c11f 2012 5' Root 519bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.25118e-62
whxb_3046_c11r 2012 3' Root 324bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 174 1.17282e-41
whxb_13022_k07f 2012 5' Root 485bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.06104e-58
whxb_13022_k07r 2012 3' Root 459bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.35316e-65
whxb_40004_n04r 2012 3' Root 282bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 58 9.15434e-07
whxc_28078_d20f 2012 5' Root, treated at 50 microM Al for 6h 391bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 3.227e-60
whxc_28078_d20r 2012 3' Root, treated at 50 microM Al for 6h 339bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 171 7.46011e-41
whxd_21009_h02r 2012 3' Root, treated at 50 microM Al for 6h 466bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.78805e-67
whxd_17051_m14f 2012 5' Root, treated at 50 microM Al for 6h 495bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 2.92919e-61
whxd_18051_m14f 2012 5' Root, treated at 50 microM Al for 6h 498bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.95891e-58
whxd_17051_m14r 2012 3' Root, treated at 50 microM Al for 6h 525bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 4.96936e-70
whxd_18051_m14r 2012 3' Root, treated at 50 microM Al for 6h 470bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 9.49791e-68
whxe_18004_n04f 2012 5' Seedling, infected with leaf rust 241bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 61 1.09406e-07
whxf_14020_n07f 2012 5' Seedling, infected with leaf rust 428bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 186 2.27173e-45
whxf_14020_n07r 2012 3' Seedling, infected with leaf rust 380bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 209 3.27364e-52
whxf_14020_n08f 2012 5' Seedling, infected with leaf rust 106bp Contig3375       CONSTANSinteractingprotein3[Solanumlycopersicum] 77 1.97599e-12
HX108474 whxq_15048_b11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 432bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 196 2.85498e-48
HX108475 whxq_16048_b11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 434bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 196 2.84287e-48
HX108494 whxq_15048_b11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 412bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.04275e-58
HX108495 whxq_16048_b11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 443bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.06132e-58
HX109543 whxq_7045_c09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 479bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 2.0174e-70
HX115128 whxq_14042_h11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 525bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.50504e-63
HX115155 whxq_14042_h11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 462bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.71468e-67
HX121556 whxq_7019_n05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 592bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.88857e-62
HX121557 whxq_8019_n05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 588bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.31114e-60
HX121584 whxq_7019_n05r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 563bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.75072e-67
HX122011 whxq_11052_n16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 482bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.03383e-58
HX122038 whxq_11052_n16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 464bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.30134e-68
HX126215 whxr_15047_b09f 2012 5' Roots, 18 day old plants were grown hydroponically 559bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 5.58906e-60
HX126241 whxr_15047_b09r 2012 3' Roots, 18 day old plants were grown hydroponically 517bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.89136e-67
HX127151 whxr_4014_c04f 2012 5' Roots, 18 day old plants were grown hydroponically 526bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 9.18008e-61
HX127178 whxr_4014_c04r 2012 3' Roots, 18 day old plants were grown hydroponically 505bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.28822e-68
HX129455 whxr_23011_e02f 2012 5' Roots, 18 day old plants were grown hydroponically 533bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.70981e-63
HX129482 whxr_23011_e02r 2012 3' Roots, 18 day old plants were grown hydroponically 508bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.01592e-69
HX131055 whxr_30043_f10f 2012 5' Roots, 18 day old plants were grown hydroponically 523bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.40265e-63
HX131081 whxr_30043_f10r 2012 3' Roots, 18 day old plants were grown hydroponically 480bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 2.0174e-70
HX131750 whxr_12092_f24r 2012 3' Roots, 18 day old plants were grown hydroponically 124bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.2992e-13
HX131926 whxr_15010_g04f 2012 5' Roots, 18 day old plants were grown hydroponically 362bp Contig3375       CONSTANSinteractingprotein3[Solanumlycopersicum] 90 1.67988e-16
HX131949 whxr_15010_g04r 2012 3' Roots, 18 day old plants were grown hydroponically 341bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 115 6.32059e-24
HX133715 whxr_5058_h15f 2012 5' Roots, 18 day old plants were grown hydroponically 530bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.34055e-62
HX133739 whxr_5058_h15r 2012 3' Roots, 18 day old plants were grown hydroponically 514bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.03645e-69
HX135449 whxr_21007_j02f 2012 5' Roots, 18 day old plants were grown hydroponically 523bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 4.40265e-63
HX135475 whxr_21007_j02r 2012 3' Roots, 18 day old plants were grown hydroponically 513bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 2.03743e-70
HX138001 whxr_2006_l04r 2012 3' Roots, 18 day old plants were grown hydroponically 314bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 165 6.94439e-39
HX140812 whxr_11036_n12r 2012 3' Roots, 18 day old plants were grown hydroponically 459bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.72665e-67
HX140889 whxr_10051_n14f 2012 5' Roots, 18 day old plants were grown hydroponically 530bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.34055e-62
HX140911 whxr_10051_n14r 2012 3' Roots, 18 day old plants were grown hydroponically 506bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.87854e-69
HX142400 whxr_11081_o21f 2012 5' Roots, 18 day old plants were grown hydroponically 494bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 229 3.97717e-58
HX142422 whxr_11081_o21r 2012 3' Roots, 18 day old plants were grown hydroponically 475bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 3.70172e-64
HX146129 whxs_21013_c02f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 525bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.80808e-63
HX146158 whxs_21013_c02r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 504bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.89545e-69
HX146385 whxs_21030_c07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 486bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 230 1.06104e-58
HX146410 whxs_21030_c07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 461bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.71468e-67
HX149137 whxs_8060_e15f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 439bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 196 2.81866e-48
HX149165 whxs_8060_e15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 400bp Contig3375       PREDICTED:peptidyl-prolylisomeraseFKBP12-like[Brachypodiumdistachyon] 224 9.88094e-57
HX153042 whxs_19089_h21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 45bp Contig3375       FKBPprotein[Chimonanthuspraecox] 37 1.34259
HX157859 whxs_7070_l19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 566bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.66037e-62
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