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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whpc_7019_n05f 2012 5' Anther at meiosis 731bp Contig32879       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 508 8.72278e-142
whv_1615057_h13f 2012 5' Shoot grown under cold condition for 16days 581bp Contig32879       leucinezipperproteinzip1[Triticumaestivum] 401 5.08027e-110
whxf_19032_b07f 2012 5' Seedling, infected with leaf rust 546bp Contig32879       leucinezipperproteinzip1[Triticumaestivum] 382 3.4181e-104
whxf_20032_b07f 2012 5' Seedling, infected with leaf rust 285bp Contig32879       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 201 6.91835e-50
whxh_40021_k06f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 597bp Contig32879       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 413 1.82789e-113
HX000056 whxi_6016_a03f 2012 5' Two-week old seedlings(22℃ 16L-8D) 69bp Contig32879       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 53 2.12542e-05
HX000057 whxi_8016_a03f 2012 5' Two-week old seedlings(22℃ 16L-8D) 69bp Contig32879       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 53 2.12542e-05
HX009448 whxi_3001_p02f 2012 5' Two-week old seedlings(22℃ 16L-8D) 351bp Contig32879       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 236 1.9251e-60
HX022699 whxk_10044_e11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 505bp Contig32879       PREDICTED:magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic-like[Brachypodiumdistachyon] 352 2.41252e-95
HX096985 whxp_23072_i19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 547bp Contig32879       leucinezipperproteinzip1[Triticumaestivum] 384 9.17857e-105
whxv_10045_d10f 2012 5' Leaves, plant was grown at constant 23℃ 778bp Contig32879       putativeleucinezipperprotein[Triticumaestivum] 526 3.51607e-147
whxv_2041_h09f 2012 5' Leaves, plant was grown at constant 23℃ 654bp Contig32879       leucinezipperproteinzip1[Triticumaestivum] 431 8.10458e-119
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