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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_1021_i02f 2012 5' Seed DPA10 485bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.16768e-73
whe_1021_i02r 2012 3' Seed DPA10 363bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 4.88771e-16
whe_20021_i02r 2012 3' Seed DPA10 251bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.8423e-13
whh_17070_i11r 2012 3' Spike at heading date 257bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 2.39195e-26
whsd_4034_o11f 2012 5' Shoot grown with dessication 472bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 1.16936e-25
whsd_4034_o11r 2012 3' Shoot grown with dessication 423bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 2.71875e-30
whxe_23053_k14f 2012 5' Seedling, infected with leaf rust 449bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 9.80275e-73
whxf_13056_i16f 2012 5' Seedling, infected with leaf rust 603bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.18706e-106
whxg_17057_g13f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 435bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 90 1.68218e-16
whxg_17057_g13r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 414bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 2.33497e-26
whxg_14071_j18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 543bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 1.05341e-36
whxg_14071_j18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 502bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.23068e-43
whxg_23066_o19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 362bp Contig32783       PREDICTED:monoglyceridelipase-like[Brachypodiumdistachyon] 235 3.23318e-60
whxg_24066_o19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 254bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.89304e-39
whxg_23066_o19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 532bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 4.17692e-56
HX000619 whxi_5015_b01f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 387bp Contig32783       PREDICTED:monoglyceridelipase-like[Brachypodiumdistachyon] 233 1.60801e-59
HX000620 whxi_6015_b01f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 55bp Contig32783       monoglyceridelipaseisoform2-likeprotein,partial[Loliumperenne] 38 0.683017
HX000630 whxi_5015_b01r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 435bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.05121e-26
HX027779 whxk_7003_m02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 290bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000256683
HX027780 whxk_8003_m02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 290bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000256683
HX052121 whxn_37048_b12f 2012 5' Leaves, plant was grown at constant 23Ž 54bp Contig32783       monoglyceridelipaseisoform2-likeprotein,partial[Loliumperenne] 39 0.248558
HX074535 whxo_15030_d07f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 591bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 322 4.11284e-86
HX074537 whxo_17030_d07f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 404bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 4.70849e-67
HX123273 whxq_7065_o18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 434bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 6.81375e-26
whxv_6031_a06f 2012 5' Leaves, plant was grown at constant 23Ž 558bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 1.32116e-32
whxv_6031_a06r 2012 3' Leaves, plant was grown at constant 23Ž 516bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.06914e-45
whxv_1059_f14f 2012 5' Leaves, plant was grown at constant 23Ž 730bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 434 1.60076e-119
whxv_1059_f14r 2012 3' Leaves, plant was grown at constant 23Ž 759bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 1.25328e-93
whxw_2003_m02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 677bp Contig32783       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 1.2473e-48
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