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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 40
First Previous 1-40 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_15092_e24f 2012 5' Callus 708bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 1.04522e-104
whcs_15092_e24r 2012 3' Callus 547bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 9.28563e-65
whf_10049_a04f 2012 5' Spike at flowering date 407bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 1.78189e-66
whf_10049_a04r 2012 3' Spike at flowering date 398bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.02431e-61
whkp_7007_i02r 2012 3' Shoot grown under continuous light 671bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 3.50664e-88
whms_15045_c09f 2012 5' Seed DPA5 of DT3DL CS wheat 456bp Contig3215       PREDICTED:mitochondrialoutermembraneproteinporinof36kDa-like[Brachypodiumdistachyon] 68 8.954e-10
whms_15045_c09r 2012 3' Seed DPA5 of DT3DL CS wheat 438bp Contig3215       PREDICTED:mitochondrialoutermembraneproteinporinof36kDa-like[Brachypodiumdistachyon] 101 7.26571e-20
whms_19040_j11f 2012 5' Seed DPA5 of DT3DL CS wheat 599bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 2.30661e-100
whms_19040_j11r 2012 3' Seed DPA5 of DT3DL CS wheat 726bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 367 1.82267e-99
whpc_17080_a20f 2012 5' Anther at meiosis 723bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 440 1.678e-121
whpc_17080_a20r 2012 3' Anther at meiosis 728bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 4.20193e-96
whsp_12016_a03r 2012 3' 599bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 2.72472e-101
whv3_3086_k23r 2012 3' Shoot grown under cold condition for 3days 140bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 4.85935e-16
whvs_11093_d21f 2012 5' Liquid cultured tissue 676bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 2.47275e-105
whvs_11093_d21r 2012 3' Liquid cultured tissue 723bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 4.1219e-96
whxb_23095_a21f 2012 5' Root 610bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.73334e-90
whxb_23095_a21r 2012 3' Root 554bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.03177e-66
whxb_24022_k07f 2012 5' Root 606bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 3.15889e-92
whxb_25022_k07f 2012 5' Root 45bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 5.10184
whxb_24022_k07r 2012 3' Root 656bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 3.50298e-61
whxb_25022_k07r 2012 3' Root 52bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 37 1.4321
whxb_20069_k17r 2012 3' Root 178bp Contig3215            
whxc_9010_h03f 2012 5' Root, treated at 50 microM Al for 6h 503bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 4.65493e-43
whxc_9010_h03r 2012 3' Root, treated at 50 microM Al for 6h 459bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 3.13419e-47
whxc_16055_i14f 2012 5' Root, treated at 50 microM Al for 6h 582bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 4.47123e-90
whxc_16055_i14r 2012 3' Root, treated at 50 microM Al for 6h 531bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.90042e-62
whxc_35087_i22f 2012 5' Root, treated at 50 microM Al for 6h 483bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.16498e-81
whxc_35087_i22r 2012 3' Root, treated at 50 microM Al for 6h 587bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.00158e-68
whxd_6086_k23f 2012 5' Root, treated at 50 microM Al for 6h 526bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.13768e-90
whxd_6086_k23r 2012 3' Root, treated at 50 microM Al for 6h 621bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 6.1523e-62
whxf_3029_d06f 2012 5' Seedling, infected with leaf rust 623bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.74068e-99
whxf_3029_d06r 2012 3' Seedling, infected with leaf rust 478bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.51945e-52
whxf_32065_p17f 2012 5' Seedling, infected with leaf rust 586bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.89395e-92
whxg_31005_k02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 364bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 6.48918e-61
whxg_32005_k02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 353bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.37431e-58
HX165277 whxt_10080_b20f 2012 5' Roots, 18 day old plants were grown hydroponically 710bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 1.38852e-80
HX165304 whxt_10080_b20r 2012 3' Roots, 18 day old plants were grown hydroponically 687bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.4091e-87
HX179296 whxt_5004_n04f 2012 5' Roots, 18 day old plants were grown hydroponically 599bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 157 1.79919e-36
HX179323 whxt_5004_n04r 2012 3' Roots, 18 day old plants were grown hydroponically 581bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.17439e-44
whyd_6081_a06r 2012 3' Spikelet at late flowering 574bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.14536e-66
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