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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 82
First Previous 1-82 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_18001_p01f 2012 5' Dormant seed with water absorption after breaking 445bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 281 5.22038e-74
whei_18001_p01r 2012 3' Dormant seed with water absorption after breaking 648bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 7.71193e-90
whem_16024_i08f 2012 5' Dormant seed with water absorption 524bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 2.65863e-76
whem_16024_i08r 2012 3' Dormant seed with water absorption 618bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 6.32249e-83
whms_12015_a02r 2012 3' Seed DPA5 of DT3DL CS wheat 648bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 6.97515e-91
whoh_13092_h24f 2012 5' Pistil at heading date 636bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 333 8.07817e-93
whr_10091_d06f 2012 5' Root 462bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 305 3.39238e-81
whrd_17076_e20f 2012 5' Root of dessiccated seed 632bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 5.51015e-106
whrd_17076_e20r 2012 3' Root of dessiccated seed 651bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 7.14953e-91
whsc_14058_h15f 2012 5' Shoot grown with cold treatment 323bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.35125e-13
whsc_14058_h15r 2012 3' Shoot grown with cold treatment 301bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.88497e-21
whsl_31068_f23r 2012 3' Seed DPA30 546bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 4.50578e-72
whsp_18063_a13f 2012 5' 548bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 329 2.05428e-88
whsp_18063_a13r 2012 3' 656bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 340 2.48723e-91
whvd_5096_b23f 2012 5' Shoot grown with dessication 751bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 407 2.2339e-111
whvd_5096_b23r 2012 3' Shoot grown with dessication 703bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 5.25966e-101
whvs_3003_n01r 2012 3' Liquid cultured tissue 408bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 271 5.33064e-71
whxa_19087_i22f 2012 5' Root 65bp Contig31320       PREDICTED:ras-relatedproteinRab-1B[Callithrixjacchus] 47 0.00139073
whxc_24015_a01f 2012 5' Root, treated at 50 microM Al for 6h 400bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 258 4.72779e-67
whxc_24015_a01r 2012 3' Root, treated at 50 microM Al for 6h 603bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 2.20233e-82
whxc_34032_a08f 2012 5' Root, treated at 50 microM Al for 6h 265bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 4.47438e-17
whxc_34032_a08r 2012 3' Root, treated at 50 microM Al for 6h 92bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 40 0.199436
whxc_3053_k14f 2012 5' Root, treated at 50 microM Al for 6h 606bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 8.17165e-101
whxc_3053_k14r 2012 3' Root, treated at 50 microM Al for 6h 656bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 340 2.48723e-91
whxd_25072_i19f 2012 5' Root, treated at 50 microM Al for 6h 448bp Contig31320       hypotheticalprotein[Amblyommamaculatum] 262 3.26329e-68
whxd_25072_i19r 2012 3' Root, treated at 50 microM Al for 6h 609bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 144 2.18521e-32
whxd_7051_m14f 2012 5' Root, treated at 50 microM Al for 6h 555bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 6.47759e-61
whxd_7051_m14r 2012 3' Root, treated at 50 microM Al for 6h 560bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 7.17024e-71
whxd_36084_m24f 2012 5' Root, treated at 50 microM Al for 6h 622bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 1.62636e-94
whxe_2060_f15f 2012 5' Seedling, infected with leaf rust 659bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 6.17137e-106
whxe_2060_f15r 2012 3' Seedling, infected with leaf rust 663bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.03413e-92
whxe_27067_n18f 2012 5' Seedling, infected with leaf rust 656bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 1.15001e-104
whxe_2018_p08f 2012 5' Seedling, infected with leaf rust 660bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 3.06282e-105
whxe_2018_p08r 2012 3' Seedling, infected with leaf rust 645bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 2.85165e-68
whxf_9041_g09f 2012 5' Seedling, infected with leaf rust 611bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 8.41558e-101
whxf_9041_g09r 2012 3' Seedling, infected with leaf rust 533bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 1.67125e-68
whxf_13090_g24f 2012 5' Seedling, infected with leaf rust 525bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 9.2014e-53
whxf_13090_g24r 2012 3' Seedling, infected with leaf rust 509bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.20993e-63
whxf_6057_h14f 2012 5' Seedling, infected with leaf rust 611bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 2.89239e-101
whxf_6057_h14r 2012 3' Seedling, infected with leaf rust 555bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.81702e-71
whxf_18019_n06f 2012 5' Seedling, infected with leaf rust 604bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 8.89997e-100
whxf_18019_n06r 2012 3' Seedling, infected with leaf rust 659bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 6.53621e-23
whxf_18067_n17f 2012 5' Seedling, infected with leaf rust 602bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.67846e-98
whxf_18067_n17r 2012 3' Seedling, infected with leaf rust 422bp Contig31320            
whxg_24046_d11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 426bp Contig31320       hypotheticalprotein[Amblyommamaculatum] 260 9.51824e-68
whxg_24046_d11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 641bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 1.0186e-78
whxg_35033_o09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 269bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 9.2969e-15
whxh_31037_k09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 616bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 4.32768e-76
whxh_32037_k09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 556bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.79377e-66
whxh_31037_k09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 558bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.04556e-82
whxh_32037_k09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 551bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 1.60809e-80
whxh_25005_l02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 634bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 5.58362e-106
whxh_26005_l02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 548bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 333 2.42665e-89
whxh_25005_l02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 734bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 2.95849e-105
whxh_26005_l02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 609bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 4.27928e-81
whxh_26066_p20f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 641bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 8.27491e-105
whxh_26066_p20r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 616bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 6.14686e-83
HX005512 whxi_16072_i19f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 469bp Contig31320       hypotheticalprotein[Amblyommamaculatum] 262 3.2789e-68
HX005528 whxi_16072_i19r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 310bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.08432e-23
HX014880 whxj_10090_h23f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 323bp Contig31320       hypotheticalprotein[Amblyommamaculatum] 192 5.43535e-47
HX014882 whxj_11090_h23f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 452bp Contig31320       hypotheticalprotein[Amblyommamaculatum] 259 3.59237e-67
HX014894 whxj_10090_h23r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 430bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.56658e-46
HX014895 whxj_11090_h23r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 267bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 4.94701e-16
HX041587 whxm_5029_c06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 402bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 258 4.70849e-67
HX041599 whxm_5029_c06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 502bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.30879e-61
HX041866 whxm_5077_c17r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 330bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 144 1.28516e-32
HX097249 whxp_15088_i24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 522bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 329 3.02779e-88
HX145205 whxs_27031_b06r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 730bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 8.44699e-105
HX185815 whxu_3061_c14f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 727bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 2.81197e-100
HX185843 whxu_3061_c14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 731bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 5.90544e-106
HX187182 whxu_5077_d18f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 818bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 407 2.63618e-111
HX187209 whxu_5077_d18r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 730bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 1.59303e-103
HX193945 whxu_8040_j11f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 793bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 407 2.45912e-111
HX193970 whxu_8040_j11r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 683bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.25771e-96
whyd_18073_c23f 2012 5' Spikelet at late flowering 489bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 299 1.8515e-79
whyd_18074_c23r 2012 3' Spikelet at late flowering 453bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.83811e-69
whyd_6031_l08f 2012 5' Spikelet at late flowering 613bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.325e-98
whyd_6030_l08r 2012 3' Spikelet at late flowering 531bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 4.30243e-69
whyd_26007_m07f 2012 5' Spikelet at late flowering 197bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 128 5.64597e-28
whyd_26007_m07r 2012 3' Spikelet at late flowering 533bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.08327e-67
whyd_4063_o22f 2012 5' Spikelet at late flowering 544bp Contig31320       PREDICTED:ras-relatedproteinRIC1-like[Brachypodiumdistachyon] 328 7.65013e-88
whyd_4064_o22r 2012 3' Spikelet at late flowering 502bp Contig31320       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.39508e-71
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