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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 93
First Previous 1-93 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_19016_b04r 2012 3' Callus 714bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 423 2.69233e-116
whcs_5025_g05f 2012 5' Callus 677bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.67794e-117
whcs_5025_g05r 2012 3' Callus 736bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 4.44155e-117
whdl_24058_c10f 2012 5' Crown of seedling 528bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 5.22289e-91
whdl_24058_c10r 2012 3' Crown of seedling 513bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.01352e-61
whdl_23072_m11f 2012 5' Crown of seedling 524bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 5.51794e-90
whdl_23072_m11r 2012 3' Crown of seedling 405bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 3.86277e-45
whdl_5064_p04f 2012 5' Crown of seedling 449bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 272 3.15344e-71
whdl_5064_p04r 2012 3' Crown of seedling 540bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 4.89184e-79
whei_2013_c01r 2012 3' Dormant seed with water absorption after breaking 559bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.41822e-65
whei_10028_e08r 2012 3' Dormant seed with water absorption after breaking 563bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.85854e-83
whei_3058_g16r 2012 3' Dormant seed with water absorption after breaking 556bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.33486e-65
whei_13022_l08f 2012 5' Dormant seed with water absorption after breaking 539bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.41656e-94
whei_13022_l08r 2012 3' Dormant seed with water absorption after breaking 661bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 9.97004e-104
whei_15017_p05r 2012 3' Dormant seed with water absorption after breaking 562bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.18463e-65
whem_6095_b21r 2012 3' Dormant seed with water absorption 126bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 68 9.01385e-10
whem_10027_f06r 2012 3' Dormant seed with water absorption 643bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 6.02017e-95
whem_8060_f15r 2012 3' Dormant seed with water absorption 614bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 7.03291e-79
whem_18076_f19r 2012 3' Dormant seed with water absorption 613bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.63433e-78
whem_3091_f22f 2012 5' Dormant seed with water absorption 366bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 254 1.13831e-65
whem_13009_g02f 2012 5' Dormant seed with water absorption 421bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 4.28057e-76
whem_13009_g02r 2012 3' Dormant seed with water absorption 646bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.39177e-99
whem_6010_g04f 2012 5' Dormant seed with water absorption 577bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 1.43218e-101
whem_6010_g04r 2012 3' Dormant seed with water absorption 659bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.51136e-99
whem_19007_i02r 2012 3' Dormant seed with water absorption 563bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 2.59746e-68
whem_13056_j16r 2012 3' Dormant seed with water absorption 639bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 7.40554e-98
whem_2001_p02f 2012 5' Dormant seed with water absorption 402bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 277 9.79505e-73
whem_2001_p02r 2012 3' Dormant seed with water absorption 557bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 5.37591e-79
whem_2081_p21f 2012 5' Dormant seed with water absorption 492bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 7.18118e-92
whem_2081_p21r 2012 3' Dormant seed with water absorption 592bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.00119e-76
whf_7091_d24f 2012 5' Spike at flowering date 529bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 3.53659e-92
whms_18064_a16f 2012 5' Seed DPA5 of DT3DL CS wheat 721bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 4.23592e-117
whms_18064_a16r 2012 3' Seed DPA5 of DT3DL CS wheat 772bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 1.72159e-106
whms_18030_c07f 2012 5' Seed DPA5 of DT3DL CS wheat 687bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 414 1.49506e-113
whms_18030_c07r 2012 3' Seed DPA5 of DT3DL CS wheat 774bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 406 3.05755e-111
whms_20040_j12f 2012 5' Seed DPA5 of DT3DL CS wheat 551bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 3.44583e-99
whms_20040_j12r 2012 3' Seed DPA5 of DT3DL CS wheat 782bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 405 9.12039e-111
whok_1093_d22f 2012 5' Seed DPA5 656bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 414 1.35532e-113
whok_5059_f13f 2012 5' Seed DPA5 681bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.71927e-117
whok_5059_f13r 2012 3' Seed DPA5 733bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.96115e-102
whpc_13017_p06f 2012 5' Anther at meiosis 692bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.47613e-116
whpc_13017_p06r 2012 3' Anther at meiosis 742bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 4.5238e-117
whr_20008_n13f 2012 5' Root 548bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.50537e-94
whsc_7008_i03f 2012 5' Shoot grown with cold treatment 558bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.77721e-98
whsc_7008_i03r 2012 3' Shoot grown with cold treatment 615bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 7.03291e-79
whsc_17088_j24f 2012 5' Shoot grown with cold treatment 536bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 2.6101e-101
whsc_17088_j24r 2012 3' Shoot grown with cold treatment 547bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.13078e-77
whsl_4084_e06f 2012 5' Seed DPA30 414bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 5.54474e-36
whsl_4083_e06r 2012 3' Seed DPA30 435bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.27611e-48
whsl_31059_g16f 2012 5' Seed DPA30 590bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.24371e-99
whsl_32059_g16f 2012 5' Seed DPA30 64bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000164282
whsl_31059_g16r 2012 3' Seed DPA30 467bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 6.41403e-56
whsl_1092_h06r 2012 3' Seed DPA30 308bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 5.94988e-22
whsp_10075_e18f 2012 5' 452bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.0963e-83
whsp_10075_e18r 2012 3' 771bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 4.87015e-117
whsp_8022_l08f 2012 5' 596bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 4.50225e-112
whsp_8022_l08r 2012 3' 782bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 3.46574e-110
whvd_16051_m14f 2012 5' Shoot grown with dessication 683bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.76059e-117
whvs_14036_n11f 2012 5' Liquid cultured tissue 719bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 4.19479e-117
whxa_18005_k02f 2012 5' Root 580bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.40766e-106
whxa_18005_k02r 2012 3' Root 759bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 1.29094e-106
whxa_12069_k18f 2012 5' Root 289bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 200 1.53572e-49
whxa_12069_k18r 2012 3' Root 756bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 3.36766e-107
whxa_9034_p11f 2012 5' Root 267bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 185 3.88355e-45
whxa_9034_p11r 2012 3' Root 648bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 4.81926e-100
whxb_20015_a01f 2012 5' Root 455bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.17497e-56
whxb_20015_a01r 2012 3' Root 428bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.36865e-66
whxb_4095_b21f 2012 5' Root 536bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 5.82819e-93
whxb_6030_d08r 2012 3' Root 347bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 8.4804e-24
whxb_5077_d18f 2012 5' Root 616bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 9.723e-113
whxb_5077_d18r 2012 3' Root 345bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.03666e-21
whxb_40028_e08r 2012 3' Root 436bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.61803e-35
whxb_32053_k13f 2012 5' Root 691bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.88457e-117
whxb_32053_k13r 2012 3' Root 676bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.64191e-107
whxc_34030_c07r 2012 3' Root, treated at 50 microM Al for 6h 470bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 5.76218e-65
whxc_5011_e01r 2012 3' Root, treated at 50 microM Al for 6h 115bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 79 3.02112e-13
whxc_1028_e08r 2012 3' Root, treated at 50 microM Al for 6h 436bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.61803e-35
whxc_13008_i03r 2012 3' Root, treated at 50 microM Al for 6h 223bp Contig30307       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 158 8.76524e-37
whxd_39073_g18r 2012 3' Root, treated at 50 microM Al for 6h 434bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 4.70774e-35
whxd_19036_n12f 2012 5' Root, treated at 50 microM Al for 6h 649bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 3.13828e-83
whxd_19036_n12r 2012 3' Root, treated at 50 microM Al for 6h 632bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 5.34941e-93
whxd_20036_n12r 2012 3' Root, treated at 50 microM Al for 6h 112bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 7.99837e-14
whxf_35067_m17f 2012 5' Seedling, infected with leaf rust 665bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 423 1.77234e-116
HX116155 whxq_22039_i09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 616bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 413 1.95912e-113
HX116182 whxq_22039_i09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 608bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 6.83197e-79
HX163828 whxt_24064_a15f 2012 5' Roots, 18 day old plants were grown hydroponically 809bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 413 3.59613e-113
HX163851 whxt_24064_a15r 2012 3' Roots, 18 day old plants were grown hydroponically 652bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 5.79077e-85
HX187811 whxu_20028_e07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 810bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 413 3.59613e-113
HX187837 whxu_20028_e07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 784bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 2.83516e-112
whyd_14014_l01f 2012 5' Spikelet at late flowering 552bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 4.07988e-92
whyd_14014_l01r 2012 3' Spikelet at late flowering 503bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.02167e-63
whyd_7032_p02f 2012 5' Spikelet at late flowering 533bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.0288e-90
whyd_7032_p02r 2012 3' Spikelet at late flowering 465bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.2813e-63
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