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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 100
First Previous 1-100 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10007_i02f 2012 5' Callus 560bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.24196e-51
whcs_7082_o23f 2012 5' Callus 552bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.9367e-51
whcs_7082_o23r 2012 3' Callus 510bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.16306e-51
whdl_26017_a08f 2012 5' Crown of seedling 518bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.47121e-51
whdl_26017_a08r 2012 3' Crown of seedling 496bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.15014e-51
whe_9065_n04f 2012 5' Seed DPA10 473bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.15748e-51
whe_9065_n04r 2012 3' Seed DPA10 441bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.06793e-51
whei_12095_a22f 2012 5' Dormant seed with water absorption after breaking 519bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.44081e-51
whei_12095_a22r 2012 3' Dormant seed with water absorption after breaking 507bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.19202e-51
whem_12091_f22f 2012 5' Dormant seed with water absorption 505bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.22097e-51
whem_12091_f22r 2012 3' Dormant seed with water absorption 536bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.20758e-51
whem_2024_i08f 2012 5' Dormant seed with water absorption 508bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.19202e-51
whem_2024_i08r 2012 3' Dormant seed with water absorption 539bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.36093e-51
whf_13046_l03f 2012 5' Spike at flowering date 471bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.18499e-51
whhg_16059_f13f 2012 5' Anther at meiosis of MT4B CS wheat 519bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 2.45906e-50
whhg_17025_g06f 2012 5' Anther at meiosis of MT4B CS wheat 522bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.59417e-51
whhg_5051_n13f 2012 5' Anther at meiosis of MT4B CS wheat 560bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.24196e-51
whhg_5051_n13r 2012 3' Anther at meiosis of MT4B CS wheat 527bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.74752e-51
whkp_9067_n18f 2012 5' Shoot grown under continuous light 159bp Contig2953            
whkp_9067_n18r 2012 3' Shoot grown under continuous light 150bp Contig2953            
whkv_15089_g22f 2012 5' Shoot grown with continuous light after cold treatment 580bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.1143e-51
whkv_15089_g22r 2012 3' Shoot grown with continuous light after cold treatment 546bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.47881e-51
whkv_15041_h09r 2012 3' Shoot grown with continuous light after cold treatment 317bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 1.89519e-23
whms_2044_f11f 2012 5' Seed DPA5 of DT3DL CS wheat 597bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.87382e-51
whms_2044_f11r 2012 3' Seed DPA5 of DT3DL CS wheat 540bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.36093e-51
whms_11009_h02f 2012 5' Seed DPA5 of DT3DL CS wheat 549bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.63144e-51
whms_11009_h02r 2012 3' Seed DPA5 of DT3DL CS wheat 495bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.12191e-51
whoh_25017_a08r 2012 3' Pistil at heading date 54bp Contig2953            
whoh_19074_c05f 2012 5' Pistil at heading date 395bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 9.05183e-42
whoh_24019_e14f 2012 5' Pistil at heading date 177bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.36291e-26
whoh_6044_g09f 2012 5' Pistil at heading date 542bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.51428e-51
whoh_6044_g09r 2012 3' Pistil at heading date 492bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.17837e-51
whok_9018_o07r 2012 3' Seed DPA5 85bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 37 1.30036
whok_9018_o08r 2012 3' Seed DPA5 48bp Contig2953            
whr_13046_l03r 2012 3' Root 501bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.09368e-51
whsl_19076_h05f 2012 5' Seed DPA30 554bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.9367e-51
whsl_20077_h05f 2012 5' Seed DPA30 615bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 1.07339e-50
whsl_19077_h05r 2012 3' Seed DPA30 385bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 149 3.98831e-34
whsl_20076_h05r 2012 3' Seed DPA30 346bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.61702e-49
whsl_29077_k17f 2012 5' Seed DPA30 528bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.90087e-51
whsl_29078_k17r 2012 3' Seed DPA30 458bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.10257e-51
whsl_9055_m10f 2012 5' Seed DPA30 589bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.41811e-51
whsl_9055_m10r 2012 3' Seed DPA30 551bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.78407e-51
whva_7026_d14r 2012 3' Shoot with ABA treatment 419bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.2255e-30
whvd_11024_i08f 2012 5' Shoot grown with dessication 612bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 1.05827e-50
whvd_11024_i08r 2012 3' Shoot grown with dessication 565bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.54721e-51
whxa_5041_h09f 2012 5' Root 457bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.10257e-51
whxa_5041_h09r 2012 3' Root 524bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.59417e-51
whxb_27054_k16f 2012 5' Root 388bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.67279e-24
whxb_27054_k16r 2012 3' Root 367bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 141 6.30433e-32
whxc_7026_g08f 2012 5' Root, treated at 50 microM Al for 6h 338bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.67186e-14
whxc_7026_g08r 2012 3' Root, treated at 50 microM Al for 6h 307bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 101 7.27324e-20
whxc_32087_j21f 2012 5' Root, treated at 50 microM Al for 6h 389bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 2.31799e-50
whxc_31087_j21r 2012 3' Root, treated at 50 microM Al for 6h 347bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 133 2.30408e-29
whxc_32087_j21r 2012 3' Root, treated at 50 microM Al for 6h 332bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.98732e-25
whxd_40046_c11f 2012 5' Root, treated at 50 microM Al for 6h 562bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.24196e-51
whxd_40046_c11r 2012 3' Root, treated at 50 microM Al for 6h 506bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.22097e-51
whxf_2078_c19f 2012 5' Seedling, infected with leaf rust 302bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00214167
whxf_3078_c19f 2012 5' Seedling, infected with leaf rust 62bp Contig2953            
whxf_2078_c19r 2012 3' Seedling, infected with leaf rust 258bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 63 2.24921e-08
whxf_5044_f12f 2012 5' Seedling, infected with leaf rust 560bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.24196e-51
whxf_5044_f12r 2012 3' Seedling, infected with leaf rust 513bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.16306e-51
whxg_9069_l18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 102bp Contig2953            
whxg_21084_m23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 577bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.96239e-51
whxg_22084_m23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 491bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.17837e-51
whxg_25084_m23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 140bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 5.19177e-18
whxg_21084_m23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 564bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.39459e-51
whxg_22084_m23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 535bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.50287e-48
HX005278 whxi_12039_i10r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 68bp Contig2953            
HX020124 whxk_11048_a11r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 325bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 133 2.29422e-29
HX034566 whxl_19090_g24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 190bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.40429e-26
HX037234 whxl_1006_l03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 327bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.85416e-47
HX037253 whxl_1006_l03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 354bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 7.35516e-28
HX047995 whxm_11052_m15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 342bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 3.79478e-48
HX048011 whxm_11052_m15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 320bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.94942e-28
HX096303 whxp_7024_i07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 592bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.57001e-51
HX096327 whxp_7024_i07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 568bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.54721e-51
HX112023 whxq_1060_e16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 526bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.74752e-51
HX112042 whxq_1060_e16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 504bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.06545e-51
HX142302 whxr_16066_o19f 2012 5' Roots, 18 day old plants were grown hydroponically 560bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.24196e-51
HX142325 whxr_16066_o19r 2012 3' Roots, 18 day old plants were grown hydroponically 524bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.59417e-51
HX146700 whxs_18061_c13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 98bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 52 3.86022e-05
HX162276 whxs_20033_p09f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 517bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 2.45906e-50
HX162301 whxs_20033_p09r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 491bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.17837e-51
HX166166 whxt_6046_c12r 2012 3' Roots, 18 day old plants were grown hydroponically 486bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.2066e-51
HX170174 whxt_23075_f18f 2012 5' Roots, 18 day old plants were grown hydroponically 596bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.87382e-51
HX170201 whxt_23075_f18r 2012 3' Roots, 18 day old plants were grown hydroponically 552bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.9367e-51
HX170530 whxt_30009_g01f 2012 5' Roots, 18 day old plants were grown hydroponically 566bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.54721e-51
HX170556 whxt_30009_g01r 2012 3' Roots, 18 day old plants were grown hydroponically 524bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.59417e-51
HX170677 whxt_2010_g04f 2012 5' Roots, 18 day old plants were grown hydroponically 556bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.9367e-51
HX170706 whxt_2010_g04r 2012 3' Roots, 18 day old plants were grown hydroponically 520bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.47121e-51
HX191782 whxu_3058_h15f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 549bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.63144e-51
HX191808 whxu_3058_h15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 511bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.16306e-51
HX196756 whxu_21070_l19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 581bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 9.1143e-51
HX196780 whxu_21070_l19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 542bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 7.51428e-51
whxv_4023_i06r 2012 3' Leaves, plant was grown at constant 23Ž 619bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 1.0885e-50
whxx_10012_e04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 565bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 8.39459e-51
whxx_10012_e04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 517bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.31714e-51
whyd_15065_a05r 2012 3' Spikelet at late flowering 528bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.74752e-51
whyd_26068_f23r 2012 3' Spikelet at late flowering 493bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 2.33705e-50
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