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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 32
First Previous 1-32 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_12032_p08f 2012 5' Crown of seedling 540bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 308 4.82564e-82
whdl_12032_p08r 2012 3' Crown of seedling 524bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 323 2.16986e-86
whf_17095_o18f 2012 5' Spike at flowering date 541bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 265 6.11862e-69
whf_17095_o18r 2012 3' Spike at flowering date 400bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 256 2.34638e-66
whms_5023_j05f 2012 5' Seed DPA5 of DT3DL CS wheat 613bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 367 1.58711e-99
whms_5023_j05r 2012 3' Seed DPA5 of DT3DL CS wheat 621bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 362 5.32754e-98
whok_12042_h11f 2012 5' Seed DPA5 741bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 431 1.06695e-118
whok_12042_h11r 2012 3' Seed DPA5 786bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 477 1.45785e-132
whok_12042_h12f 2012 5' Seed DPA5 203bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 140 1.8629e-31
whok_12042_h12r 2012 3' Seed DPA5 102bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 71 8.00649e-11
whsc_17072_i20f 2012 5' Shoot grown with cold treatment 572bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 302 3.98493e-80
whsc_17072_i20r 2012 3' Shoot grown with cold treatment 609bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 362 3.85253e-98
whxh_6017_p06f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 609bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 365 4.55086e-99
whxh_6017_p06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 627bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 358 7.90664e-97
HX012097 whxj_18061_d13f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 342bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 145 7.44899e-33
HX012112 whxj_18061_d13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 240bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 130 1.46841e-28
HX012113 whxj_19061_d13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 81bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 56 4.6414e-06
HX027204 whxk_1021_l05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 398bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 183 1.94076e-44
HX027219 whxk_1021_l05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 337bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 156 1.9015e-36
HX076074 whxo_3027_f05f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 576bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 367 4.31922e-100
HX076090 whxo_3027_f05r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 627bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 356 3.92402e-96
HX093638 whxp_15041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 178bp Contig29482            
HX093639 whxp_16041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 163bp Contig29482            
HX093640 whxp_17041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 65bp Contig29482            
HX093669 whxp_15041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 177bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 51 8.62396e-05
HX093670 whxp_16041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 170bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 51 8.67926e-05
HX180554 whxt_3017_o05f 2012 5' Roots, 18 day old plants were grown hydroponically 666bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 404 1.47013e-110
HX180580 whxt_3017_o05r 2012 3' Roots, 18 day old plants were grown hydroponically 753bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 441 1.06887e-121
HX182923 whxu_2016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 275bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 77 1.92486e-12
HX196190 whxu_2022_l07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 275bp Contig29482       20Sproteasomebeta7subunit[Triticumaestivum] 77 1.92486e-12
whxx_5057_h13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 719bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 412 4.79946e-113
whxx_5057_h13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 744bp Contig29482       PREDICTED:proteasomesubunitbetatype-4-like[Brachypodiumdistachyon] 441 1.04049e-121
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