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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 26
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_9049_a22f 2012 5' Crown of seedling 403bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 294 1.01128e-77
whdl_9049_a22r 2012 3' Crown of seedling 445bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.31679e-13
whhg_11094_d24f 2012 5' Anther at meiosis of MT4B CS wheat 315bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 235 5.46422e-60
whhg_11094_d24r 2012 3' Anther at meiosis of MT4B CS wheat 668bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 2.00082e-83
whkp_3018_o07f 2012 5' Shoot grown under continuous light 670bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 368 8.93969e-100
whkp_3018_o07r 2012 3' Shoot grown under continuous light 685bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 4.85426e-80
whkv_3009_g02f 2012 5' Shoot grown with continuous light after cold treatment 722bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 531 7.15866e-149
whkv_3009_g02r 2012 3' Shoot grown with continuous light after cold treatment 686bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 4.85426e-80
whms_3043_f10f 2012 5' Seed DPA5 of DT3DL CS wheat 641bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 348 8.58307e-94
whms_3043_f10r 2012 3' Seed DPA5 of DT3DL CS wheat 557bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.87046e-56
whsh_13001_a01f 2012 5' - 235bp Contig2932            
whsh_13001_a01r 2012 3' - 220bp Contig2932            
whsp_11016_a03f 2012 5' 579bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 412 2.87807e-113
whsp_11016_a03r 2012 3' 633bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 2.25794e-75
whsp_11016_a04f 2012 5' 45bp Contig2932       PREDICTED:temperature-sensitiveomega-3fattyaciddesaturase,chloroplastic-like[Brachypodiumdistachyon] 40 0.121432
whvd_20064_b16r 2012 3' Shoot grown with dessication 387bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 6.58927e-29
HX088750 whxp_39093_c22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 458bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.13095e-35
HX088777 whxp_39093_c22r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 518bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.59392e-49
HX099939 whxp_39086_k24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 505bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 3.42943e-33
HX099974 whxp_39086_k24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 489bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.52874e-49
HX109477 whxq_32030_c08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 625bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 433 2.49171e-119
HX109498 whxq_32030_c08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 562bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 6.71114e-69
HX111434 whxq_32011_e02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 611bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 438 7.32129e-121
HX111458 whxq_32011_e02r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 564bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 2.51002e-71
whxv_5002_p03f 2012 5' Leaves, plant was grown at constant 23 745bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 464 1.15817e-128
whxv_5002_p03r 2012 3' Leaves, plant was grown at constant 23 718bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 343 4.62448e-92
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