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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 51
First Previous 1-51 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whms_11017_p05f 2012 5' Seed DPA5 of DT3DL CS wheat 571bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.08951e-96
whms_11017_p05r 2012 3' Seed DPA5 of DT3DL CS wheat 678bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 2.66036e-83
whr_10074_c23f 2012 5' Root 414bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.45926e-49
whr_10074_c23r 2012 3' Root 565bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 5.34123e-61
whsc_20044_e11f 2012 5' Shoot grown with cold treatment 261bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.25822e-35
whsc_20044_e11r 2012 3' Shoot grown with cold treatment 343bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 7.37169e-60
whsd_5026_g08f 2012 5' Shoot grown with dessication 585bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.55873e-98
whsd_5026_g08r 2012 3' Shoot grown with dessication 674bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 2.63047e-83
whsd_7035_n10f 2012 5' Shoot grown with dessication 554bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 3.17773e-100
whsd_7035_n10r 2012 3' Shoot grown with dessication 740bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.72961e-97
whsp_19058_h16f 2012 5' 263bp Contig28562            
whva_9042_d21f 2012 5' Shoot with ABA treatment 591bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.17576e-95
whva_9042_d21r 2012 3' Shoot with ABA treatment 534bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 6.73046e-57
whvd_13080_a20f 2012 5' Shoot grown with dessication 58bp Contig28562       PREDICTED:LOWQUALITYPROTEIN:leucineaminopeptidase2,chloroplastic-like[Brachypodiumdistachyon] 41 0.117771
whvd_18018_o07f 2012 5' Shoot grown with dessication 703bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 3.31744e-79
whvd_18018_o07r 2012 3' Shoot grown with dessication 696bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 2.10109e-86
whxb_29067_n18f 2012 5' Root 568bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 2.56215e-54
whxb_29067_n18r 2012 3' Root 535bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.30787e-65
whxc_32015_a02f 2012 5' Root, treated at 50 microM Al for 6h 380bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.28136e-64
whxc_32015_a02r 2012 3' Root, treated at 50 microM Al for 6h 562bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 8.46995e-72
whxd_25026_g08f 2012 5' Root, treated at 50 microM Al for 6h 360bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.92203e-12
whxd_25026_g08r 2012 3' Root, treated at 50 microM Al for 6h 336bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 4.42082e-17
whxe_25084_n24f 2012 5' Seedling, infected with leaf rust 515bp Contig28562       RecName:Full=Leucineaminopeptidase2,chloroplastic;AltName:Full=Leucylaminopeptidase2;Short=LAP2;AltName:Full=Prolineaminopeptidase2;AltName:Full=Prolylaminopeptidase2;Flags:Precursor 170 1.8252e-73
whxe_25084_n24r 2012 3' Seedling, infected with leaf rust 625bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 8.37211e-83
whxf_32026_g07f 2012 5' Seedling, infected with leaf rust 307bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.756161
HX020187 whxk_19063_a13r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 336bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 6.14537e-19
HX032476 whxl_5062_d15f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 361bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.11154e-55
HX032477 whxl_7062_d15f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 299bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 2.12471e-43
HX032492 whxl_5062_d15r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 446bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 8.98761e-42
HX032493 whxl_7062_d15r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 161bp Contig28562            
HX045715 whxm_6088_i24f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 296bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.80522e-42
HX045731 whxm_6088_i24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 424bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 1.93573e-36
HX046471 whxm_7021_k05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 367bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 3.11433e-47
HX046487 whxm_7021_k05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 325bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 91 1.30089e-16
HX046488 whxm_8021_k05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 338bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 6.14537e-19
HX089293 whxp_18030_d07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 311bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.01351e-13
HX094842 whxp_21026_h07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 352bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.08893e-55
HX094843 whxp_22026_h07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 353bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 2.12026e-59
HX094871 whxp_21026_h07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 550bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 7.02409e-60
HX094872 whxp_22026_h07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 271bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 3.05552e-42
HX156429 whxs_4054_k15f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 734bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 477 2.1738e-132
HX156454 whxs_4054_k15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 678bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 5.36044e-84
HX156657 whxs_4070_k19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 166bp Contig28562            
HX169575 whxt_26027_f06r 2012 3' Roots, 18 day old plants were grown hydroponically 202bp Contig28562            
HX176475 whxt_25085_k21f 2012 5' Roots, 18 day old plants were grown hydroponically 481bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 6.52072e-37
HX176501 whxt_25085_k21r 2012 3' Roots, 18 day old plants were grown hydroponically 463bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.47247e-44
whxv_5023_i06f 2012 5' Leaves, plant was grown at constant 23 740bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 477 2.21443e-132
whxv_5023_i06r 2012 3' Leaves, plant was grown at constant 23 762bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 1.82124e-100
whxv_8082_o23f 2012 5' Leaves, plant was grown at constant 23 664bp Contig28562       PREDICTED:leucineaminopeptidase2,chloroplastic-like[Brachypodiumdistachyon] 349 4.19853e-94
whxv_8082_o23r 2012 3' Leaves, plant was grown at constant 23 773bp Contig28562       predictedprotein[Hordeumvulgaresubsp.vulgare] 394 1.57031e-107
whxy_10021_l05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 688bp Contig28562       PREDICTED:leucineaminopeptidase2,chloroplastic-like[Brachypodiumdistachyon] 328 8.35073e-88
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