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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 67
First Previous 1-67 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_10018_b14f 2012 5' Spike at heading date 487bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 298 4.12471e-79
whh_10018_b14r 2012 3' Spike at heading date 399bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 216 2.69084e-54
whhg_18076_e19f 2012 5' Anther at meiosis of MT4B CS wheat 754bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 443 2.17275e-122
whhg_18076_e19r 2012 3' Anther at meiosis of MT4B CS wheat 150bp Contig27885       unknown[Medicagotruncatula] 99 4.84616e-19
whhg_15074_h19f 2012 5' Anther at meiosis of MT4B CS wheat 670bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 398 6.1766e-109
whhg_15074_h19r 2012 3' Anther at meiosis of MT4B CS wheat 96bp Contig27885       PREDICTED:uncharacterizedproteinLOC754856[Strongylocentrotuspurpuratus] 64 1.67943e-08
whhg_9087_i22f 2012 5' Anther at meiosis of MT4B CS wheat 707bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 417 1.45511e-114
whkv_7046_c12f 2012 5' Shoot grown with continuous light after cold treatment 741bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 446 4.18593e-123
whkv_7046_c12r 2012 3' Shoot grown with continuous light after cold treatment 614bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 312 4.70649e-83
whkv_2043_e09f 2012 5' Shoot grown with continuous light after cold treatment 729bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 403 2.99737e-110
whkv_2043_e09r 2012 3' Shoot grown with continuous light after cold treatment 656bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 351 8.26069e-95
whok_4072_j20f 2012 5' Seed DPA5 700bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 419 3.75188e-115
whok_4072_j20r 2012 3' Seed DPA5 313bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 160 1.31451e-37
whok_5022_l07r 2012 3' Seed DPA5 682bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 364 1.02887e-98
whok_4068_m20f 2012 5' Seed DPA5 627bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 364 1.10328e-98
whok_4068_m20r 2012 3' Seed DPA5 605bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 312 4.50478e-83
whpc_7045_d10f 2012 5' Anther at meiosis 670bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 398 6.1766e-109
whpc_7045_d10r 2012 3' Anther at meiosis 682bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 373 3.77808e-101
whpc_9001_o02f 2012 5' Anther at meiosis 738bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 437 2.53952e-120
whpc_9001_o02r 2012 3' Anther at meiosis 414bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 185 3.83096e-45
whsd_4054_l15f 2012 5' Shoot grown with dessication 524bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 324 9.74007e-87
whsd_4054_l15r 2012 3' Shoot grown with dessication 574bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 309 3.25988e-82
whsd_14051_n13f 2012 5' Shoot grown with dessication 544bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 321 5.48245e-86
whsd_7002_o03f 2012 5' Shoot grown with dessication 567bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 333 2.70495e-89
whsd_7002_o03r 2012 3' Shoot grown with dessication 720bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 395 7.92941e-108
whsd_6050_p16f 2012 5' Shoot grown with dessication 542bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 317 1.35678e-84
whsd_6050_p16r 2012 3' Shoot grown with dessication 729bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 387 2.24407e-105
whsl_17069_f11f 2012 5' Seed DPA30 384bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 231 6.13497e-59
whsl_17069_f11r 2012 3' Seed DPA30 425bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 213 1.7427e-53
whsl_12055_j22r 2012 3' Seed DPA30 389bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 206 2.73816e-51
whsp_5031_a05f 2012 5' 475bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 275 4.84504e-72
whsp_4079_b18f 2012 5' 526bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 297 1.27505e-78
whsp_4079_b18r 2012 3' 545bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 283 1.65455e-74
whsp_17055_j14f 2012 5' 404bp Contig27885       unknown[Medicagotruncatula] 258 6.14947e-67
whsp_17055_j14r 2012 3' 547bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 285 4.44295e-75
whv3_11066_p19f 2012 5' Shoot grown under cold condition for 3days 669bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 391 9.86109e-107
whv3_11066_p19r 2012 3' Shoot grown under cold condition for 3days 587bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 317 1.70053e-84
whva_6041_c15f 2012 5' Shoot with ABA treatment 503bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 298 4.0309e-79
whva_6041_c15r 2012 3' Shoot with ABA treatment 569bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 291 6.91065e-77
whva_8055_m22r 2012 3' Shoot with ABA treatment 486bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 260 1.62576e-67
whvd_18081_p21f 2012 5' Shoot grown with dessication 601bp Contig27885       Ubiquitin-likeprotein[Medicagotruncatula] 357 1.57099e-96
whvd_18081_p21r 2012 3' Shoot grown with dessication 586bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 317 1.70053e-84
whxg_27027_e05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 602bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 355 4.57089e-96
whxg_27027_e05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 546bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 291 6.19963e-77
HX000030 whxi_20015_a02f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 435bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 254 8.79644e-66
HX003597 whxi_16076_f20f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 383bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 218 5.3745e-55
HX003611 whxi_16076_f20r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 320bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 136 2.7202e-30
HX010032 whxj_1015_a02f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 249bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 150 1.77858e-34
HX010043 whxj_1015_a02r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 296bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 132 3.90428e-29
HX041340 whxm_15095_b21f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 231bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 124 1.39322e-26
HX041354 whxm_15095_b21r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 672bp Contig27885       PREDICTED:polyubiquitin-A-like[Brachypodiumdistachyon] 269 2.63782e-92
HX041841 whxm_16062_c16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 729bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 395 8.16262e-108
HX043023 whxm_16060_e16f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 275bp Contig27885       unknown[Medicagotruncatula] 179 3.59661e-43
HX043024 whxm_17060_e16f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 216bp Contig27885       unknown[Lotusjaponicus] 141 8.25212e-32
HX043039 whxm_16060_e16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 689bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 375 5.95684e-102
HX043040 whxm_17060_e16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 519bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 291 5.25708e-77
HX048718 whxm_5068_n19r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 340bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 160 2.23763e-37
HX048719 whxm_6068_n19r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 296bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 148 8.97999e-34
HX072684 whxo_1015_b01f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 481bp Contig27885       PREDICTED:polyubiquitin-A-like[Brachypodiumdistachyon] 183 1.44929e-44
HX080714 whxo_1005_l01f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 434bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 182 5.54821e-44
HX080732 whxo_1005_l01r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 431bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 209 2.49529e-52
HX092409 whxp_30059_f13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 642bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 398 5.53764e-109
HX092433 whxp_30059_f13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 546bp Contig27885       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 291 6.07563e-77
HX093754 whxp_26042_g12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 525bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 321 4.83395e-86
HX093755 whxp_27042_g12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 578bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 350 1.72495e-94
HX093786 whxp_27042_g12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 312bp Contig27885       unknown[Medicagotruncatula] 202 5.14522e-50
HX171926 whxt_29010_h04f 2012 5' Roots, 18 day old plants were grown hydroponically 755bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 448 8.82127e-124
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