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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 134
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_5032_b08f 2012 5' Callus 554bp Contig27485       HistoneH3[Medicagotruncatula] 213 2.91441e-53
whcs_5032_b08r 2012 3' Callus 514bp Contig27485       HistoneH3[Medicagotruncatula] 222 4.87197e-56
whcs_19048_b11f 2012 5' Callus 668bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.25906e-69
whcs_5080_b19r 2012 3' Callus 290bp Contig27485       HistoneH3[Medicagotruncatula] 167 1.44073e-39
whcs_14039_i09f 2012 5' Callus 696bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.36822e-69
whdl_19042_d15f 2012 5' Crown of seedling 588bp Contig27485       unnamedproteinproduct[Vitisvinifera] 267 1.20222e-69
whdl_19042_d15r 2012 3' Crown of seedling 440bp Contig27485       HistoneH3[Medicagotruncatula] 218 5.30345e-55
whdl_8058_d22f 2012 5' Crown of seedling 60bp Contig27485       histone[RhizopusoryzaeRA99-880] 43 0.0191258
whdl_10014_l13f 2012 5' Crown of seedling 51bp Contig27485       histoneH3,partial[Menthasp.MC-2012] 42 0.0277301
whdl_10056_n04f 2012 5' Crown of seedling 114bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 68 6.96482e-10
whem_16034_o11r 2012 3' Dormant seed with water absorption 602bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.59742e-70
whf_12065_a17r 2012 3' Spike at flowering date 171bp Contig27485            
whf_22044_h09f 2012 5' Spike at flowering date 480bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 2.75201e-35
whhg_17052_n16f 2012 5' Anther at meiosis of MT4B CS wheat 94bp Contig27485       histoneH3,partial[Menthasp.MC-2012] 68 1.16304e-09
whhg_17052_n16r 2012 3' Anther at meiosis of MT4B CS wheat 597bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.45201e-70
whkp_5029_c05f 2012 5' Shoot grown under continuous light 722bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.47627e-69
whkp_5029_c05r 2012 3' Shoot grown under continuous light 640bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.12881e-69
whkv_9032_b07r 2012 3' Shoot grown with continuous light after cold treatment 641bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.12881e-69
whms_7004_m03f 2012 5' Seed DPA5 of DT3DL CS wheat 589bp Contig27485       HistoneH3[Medicagotruncatula] 255 4.65253e-66
whms_7004_m03r 2012 3' Seed DPA5 of DT3DL CS wheat 595bp Contig27485       unnamedproteinproduct[Vitisvinifera] 267 1.2213e-69
whoh_10059_d10f 2012 5' Pistil at heading date 171bp Contig27485       histoneH3,partial[Menthasp.MC-2012] 117 1.28385e-24
whoh_7067_e11f 2012 5' Pistil at heading date 490bp Contig27485       unnamedproteinproduct[Vitisvinifera] 267 7.76146e-70
whoh_1039_j09f 2012 5' Pistil at heading date 388bp Contig27485       HistoneH3[Medicagotruncatula] 244 6.94699e-63
whpc_18006_l03f 2012 5' Anther at meiosis 722bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.47627e-69
whpc_18006_l03r 2012 3' Anther at meiosis 696bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.36822e-69
whr_2033_n02f 2012 5' Root 543bp Contig27485       unnamedproteinproduct[Vitisvinifera] 267 9.39512e-70
whr_2024_n02r 2012 3' Root 476bp Contig27485       HistoneH3[Medicagotruncatula] 213 2.25097e-53
whsc_2072_i20f 2012 5' Shoot grown with cold treatment 642bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.12881e-69
whsl_31078_l11r 2012 3' Seed DPA30 96bp Contig27485       hypotheticalproteinOsI_04556[OryzasativaIndicaGroup] 76 2.50376e-12
whsp_18038_l11f 2012 5' 610bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.00337e-69
whsp_18038_l11r 2012 3' 600bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.45201e-70
whsp_11082_p24r 2012 3' 100bp Contig27485            
whv_1620030_d07r 2012 3' Shoot grown under cold condition for 16days 568bp Contig27485       HistoneH3[Medicagotruncatula] 254 1.59687e-65
whv_1619010_h03f 2012 5' Shoot grown under cold condition for 16days 680bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.29621e-69
whv_1619010_h03r 2012 3' Shoot grown under cold condition for 16days 541bp Contig27485       HistoneH3[Medicagotruncatula] 248 5.80542e-64
whv_1619010_h04r 2012 3' Shoot grown under cold condition for 16days 53bp Contig27485       histoneH3[Wolffiaaustraliana] 36 3.38978
whvs_16093_c21f 2012 5' Liquid cultured tissue 664bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.24459e-69
whvs_10006_l04f 2012 5' Liquid cultured tissue 602bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.59742e-70
whvs_18054_l16f 2012 5' Liquid cultured tissue 660bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.23011e-69
whxa_20084_n23f 2012 5' Root 521bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 154 1.30381e-35
whxa_20084_n23r 2012 3' Root 499bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 1.72127e-37
whxc_20030_d08f 2012 5' Root, treated at 50 microM Al for 6h 564bp Contig27485       unnamedproteinproduct[Vitisvinifera] 267 1.05455e-69
whxc_31078_d19f 2012 5' Root, treated at 50 microM Al for 6h 318bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 3.56094e-22
whxc_36057_g14f 2012 5' Root, treated at 50 microM Al for 6h 61bp Contig27485       hypotheticalproteinOsI_04556[OryzasativaIndicaGroup] 54 8.29617e-06
whxc_11026_h07f 2012 5' Root, treated at 50 microM Al for 6h 354bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 107 1.75471e-21
whxc_12026_h07f 2012 5' Root, treated at 50 microM Al for 6h 349bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 102 5.68833e-20
whxc_11026_h07r 2012 3' Root, treated at 50 microM Al for 6h 312bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.50748e-25
whxc_12026_h07r 2012 3' Root, treated at 50 microM Al for 6h 312bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.50748e-25
whxc_11023_i05f 2012 5' Root, treated at 50 microM Al for 6h 319bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 9.75603e-12
whxc_12023_i05f 2012 5' Root, treated at 50 microM Al for 6h 317bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 9.75603e-12
whxc_13023_i05f 2012 5' Root, treated at 50 microM Al for 6h 319bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 9.75603e-12
whxc_11023_i05r 2012 3' Root, treated at 50 microM Al for 6h 287bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 3.46554e-17
whxc_12023_i05r 2012 3' Root, treated at 50 microM Al for 6h 288bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 3.46554e-17
whxc_13023_i05r 2012 3' Root, treated at 50 microM Al for 6h 274bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 3.38983e-17
whxd_2028_f07f 2012 5' Root, treated at 50 microM Al for 6h 621bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.06153e-69
whxd_2028_f07r 2012 3' Root, treated at 50 microM Al for 6h 602bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.59742e-70
whxd_5087_i21f 2012 5' Root, treated at 50 microM Al for 6h 539bp Contig27485       HistoneH3[Medicagotruncatula] 214 9.29003e-54
whxd_5087_i21r 2012 3' Root, treated at 50 microM Al for 6h 521bp Contig27485       HistoneH3[Medicagotruncatula] 245 5.61632e-63
whxe_6072_i19f 2012 5' Seedling, infected with leaf rust 603bp Contig27485       HistoneH3[Medicagotruncatula] 265 8.12471e-69
whxe_7072_i19f 2012 5' Seedling, infected with leaf rust 560bp Contig27485       HistoneH3[Medicagotruncatula] 246 3.22605e-63
whxe_7072_i19r 2012 3' Seedling, infected with leaf rust 519bp Contig27485       unnamedproteinproduct[Vitisvinifera] 264 1.17388e-68
whxe_39005_l02f 2012 5' Seedling, infected with leaf rust 404bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 132 3.89671e-29
whxe_40005_l02f 2012 5' Seedling, infected with leaf rust 289bp Contig27485       HistoneH3[Medicagotruncatula] 126 3.68079e-27
whxe_39005_l02r 2012 3' Seedling, infected with leaf rust 409bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 1.73079e-37
whxe_40005_l02r 2012 3' Seedling, infected with leaf rust 335bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.58783e-29
whxf_18096_a23r 2012 3' Seedling, infected with leaf rust 575bp Contig27485       unnamedproteinproduct[Vitisvinifera] 264 1.22371e-68
whxf_19016_b04r 2012 3' Seedling, infected with leaf rust 331bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 127 1.63187e-27
whxf_20016_b04r 2012 3' Seedling, infected with leaf rust 80bp Contig27485            
whxf_33058_g15f 2012 5' Seedling, infected with leaf rust 620bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.04699e-69
whxf_19005_l02f 2012 5' Seedling, infected with leaf rust 112bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.594548
whxg_9002_p03f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 609bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.00337e-69
whxg_9002_p03r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 602bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 9.59742e-70
HX000141 whxi_20032_a07f 2012 5' Two-week old seedlingsi22 16L-8Dj 373bp Contig27485       unnamedproteinproduct[Vitisvinifera] 229 4.02432e-58
HX000155 whxi_20032_a07r 2012 3' Two-week old seedlingsi22 16L-8Dj 454bp Contig27485       HistoneH3[Medicagotruncatula] 189 3.48046e-46
HX002909 whxi_9075_e18f 2012 5' Two-week old seedlingsi22 16L-8Dj 471bp Contig27485       unnamedproteinproduct[Vitisvinifera] 263 1.90525e-68
HX003088 whxi_12011_f01r 2012 3' Two-week old seedlingsi22 16L-8Dj 361bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 3.07343e-18
HX003856 whxi_1025_g05f 2012 5' Two-week old seedlingsi22 16L-8Dj 374bp Contig27485       HistoneH3[Medicagotruncatula] 241 7.83574e-62
HX003863 whxi_2025_g05f 2012 5' Two-week old seedlingsi22 16L-8Dj 435bp Contig27485       unnamedproteinproduct[Vitisvinifera] 260 9.39819e-68
HX008419 whxi_13035_n09f 2012 5' Two-week old seedlingsi22 16L-8Dj 347bp Contig27485       unnamedproteinproduct[Vitisvinifera] 185 5.10921e-45
HX008433 whxi_13035_n09r 2012 3' Two-week old seedlingsi22 16L-8Dj 297bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.06571e-18
HX008975 whxi_17018_o07f 2012 5' Two-week old seedlingsi22 16L-8Dj 405bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 134 1.33379e-29
HX008988 whxi_17018_o07r 2012 3' Two-week old seedlingsi22 16L-8Dj 271bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.06124e-18
HX013461 whxj_1075_f18f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 496bp Contig27485       unnamedproteinproduct[Vitisvinifera] 260 9.40104e-68
HX014919 whxj_3090_h24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 327bp Contig27485       unnamedproteinproduct[Vitisvinifera] 185 5.06834e-45
HX014920 whxj_4090_h24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 48bp Contig27485       PREDICTED:histoneH3.3-like[Callithrixjacchus] 36 3.19038
HX014932 whxj_2090_h24r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 292bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.07343e-18
HX014933 whxj_3090_h24r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 268bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 3.09861e-18
HX016229 whxj_2005_k02f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 470bp Contig27485       unnamedproteinproduct[Vitisvinifera] 263 1.91376e-68
HX016245 whxj_2005_k02r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 427bp Contig27485       HistoneH3[Medicagotruncatula] 202 3.06322e-50
HX017426 whxj_15086_l24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 305bp Contig27485       unnamedproteinproduct[Vitisvinifera] 183 1.4607e-44
HX017443 whxj_15086_l24r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 313bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 3.04453e-18
HX018388 whxj_20051_n13f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 432bp Contig27485       unnamedproteinproduct[Vitisvinifera] 259 2.10261e-67
HX018399 whxj_20051_n13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 293bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 3.5523e-22
HX018928 whxj_3033_o10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 436bp Contig27485       HistoneH3[Medicagotruncatula] 257 7.92217e-67
HX022317 whxk_14093_d22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 327bp Contig27485       unnamedproteinproduct[Vitisvinifera] 185 5.06834e-45
HX022326 whxk_14093_d22r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 614bp Contig27485       unnamedproteinproduct[Vitisvinifera] 268 1.01791e-69
HX023840 whxk_11010_g03r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 295bp Contig27485       predictedprotein[Hordeumvulgaresubsp.vulgare] 63 2.23537e-08
HX024594 whxk_1025_h06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 512bp Contig27485       HistoneH3[Medicagotruncatula] 214 7.77823e-54
HX024602 whxk_2025_h06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 457bp Contig27485       HistoneH3[Medicagotruncatula] 175 3.96476e-42
HX031512 whxl_18014_c03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 356bp Contig27485       unnamedproteinproduct[Vitisvinifera] 207 9.50267e-52
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