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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 19
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whms_13028_e08f 2012 5' Seed DPA5 of DT3DL CS wheat 80bp Contig27226       predictedprotein[Hordeumvulgaresubsp.vulgare] 58 7.16066e-07
whms_13028_e08r 2012 3' Seed DPA5 of DT3DL CS wheat 67bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 42 0.0358861
whr_6086_i18f 2012 5' Root 507bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 261 5.60059e-68
whr_6085_i18r 2012 3' Root 465bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 256 1.80716e-66
whsc_12083_m22r 2012 3' Shoot grown with cold treatment 547bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 309 3.67742e-82
whsl_12050_a04f 2012 5' Seed DPA30 443bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 260 9.57699e-68
whsl_12050_a04r 2012 3' Seed DPA30 484bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 284 8.08648e-75
whsp_18033_p10f 2012 5' 625bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 344 9.04636e-93
whsp_18033_p10r 2012 3' 556bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 309 3.90257e-82
whsp_18081_p21r 2012 3' 83bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 57 1.21785e-06
whxc_23031_a05f 2012 5' Root, treated at 50 microM Al for 6h 148bp Contig27226            
whxc_25031_a05f 2012 5' Root, treated at 50 microM Al for 6h 87bp Contig27226            
whxg_16054_l15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 238bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 140 2.4287e-31
HX095442 whxp_7073_h17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 625bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 332 4.58329e-89
HX095471 whxp_7073_h17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 610bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 336 3.91826e-90
HX137923 whxr_15006_l03f 2012 5' Roots, 18 day old plants were grown hydroponically 776bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 451 1.42559e-124
HX137947 whxr_15006_l03r 2012 3' Roots, 18 day old plants were grown hydroponically 743bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 426 4.5238e-117
HX167371 whxt_5046_d12f 2012 5' Roots, 18 day old plants were grown hydroponically 784bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 457 2.02241e-126
HX167395 whxt_5046_d12r 2012 3' Roots, 18 day old plants were grown hydroponically 777bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 309 8.82258e-82
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