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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 323
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_10088_n06f 2012 5' Crown of seedling 269bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 75 7.36637e-12
whkp_7079_b18r 2012 3' Shoot grown under continuous light 47bp Contig2710            
whkp_14026_h08f 2012 5' Shoot grown under continuous light 471bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 206 2.12575e-51
whkp_14026_h08r 2012 3' Shoot grown under continuous light 358bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 171 9.81833e-41
whkp_15053_k14f 2012 5' Shoot grown under continuous light 185bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.95812
whkp_15053_k14r 2012 3' Shoot grown under continuous light 138bp Contig2710       hypotheticalproteinRO3G_04269[RhizopusoryzaeRA99-880] 35 8.32733
whkp_3004_m04f 2012 5' Shoot grown under continuous light 320bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 178 6.7663e-45
whkp_3004_m04r 2012 3' Shoot grown under continuous light 630bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 360 1.60693e-97
whkv_19004_m04r 2012 3' Shoot grown with continuous light after cold treatment 397bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 197 9.94433e-49
whsh_7034_b21f 2012 5' - 193bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.93902
whsh_7034_b21r 2012 3' - 134bp Contig2710            
whsh_14089_c06r 2012 3' - 109bp Contig2710            
whsh_4026_d02r 2012 3' - 204bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 71 8.13711e-11
whsh_8067_e05f 2012 5' - 190bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.94857
whsh_8067_e05r 2012 3' - 151bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.84567
whsh_1043_g21r 2012 3' - 253bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 91 1.32013e-16
whsh_1005_i01r 2012 3' - 176bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 40 0.25966
whsh_3007_m07f 2012 5' - 201bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.91038
whsh_3007_m07r 2012 3' - 152bp Contig2710            
whsh_2063_o10f 2012 5' - 189bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.94857
whsh_2063_o10r 2012 3' - 165bp Contig2710            
whsp_10031_a05r 2012 3' 60bp Contig2710       putativechlorophyllA-BbindingproteintypeI[Cupressussempervirens] 39 0.360697
whv_162009_g01f 2012 5' Shoot grown under cold condition for 16days 543bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 267 1.60257e-69
whv_162009_g01r 2012 3' Shoot grown under cold condition for 16days 373bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 190 1.21931e-46
whv_1616057_g14f 2012 5' Shoot grown under cold condition for 16days 506bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 230 1.38268e-58
whv_1616057_g14r 2012 3' Shoot grown under cold condition for 16days 468bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 248 4.87798e-64
whv_1612090_g24f 2012 5' Shoot grown under cold condition for 16days 515bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 350 9.30927e-95
whv_1612090_g24r 2012 3' Shoot grown under cold condition for 16days 338bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 160 1.71984e-37
whv_1618024_i07f 2012 5' Shoot grown under cold condition for 16days 587bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 407 9.56705e-112
whv_1618024_i07r 2012 3' Shoot grown under cold condition for 16days 416bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 211 6.49242e-53
whv3_16026_h08f 2012 5' Shoot grown under cold condition for 3days 608bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 382 3.59751e-104
whv3_16026_h08r 2012 3' Shoot grown under cold condition for 3days 404bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 205 6.17806e-51
whv3_15024_i07f 2012 5' Shoot grown under cold condition for 3days 439bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 275 4.77457e-72
whv3_15024_i07r 2012 3' Shoot grown under cold condition for 3days 338bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 160 1.71984e-37
whvd_14009_g01f 2012 5' Shoot grown with dessication 561bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 354 8.41122e-96
whvd_14009_g01r 2012 3' Shoot grown with dessication 275bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 122 3.99501e-26
whvd_8090_g23f 2012 5' Shoot grown with dessication 457bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 284 6.06026e-75
whvd_8090_g23r 2012 3' Shoot grown with dessication 304bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 137 1.56788e-30
whvh_3055_j14f 2012 5' Shoot with heat shock treatment 213bp Contig2710       hypotheticalproteinPANDA_005836[Ailuropodamelanoleuca] 36 2.87219
whvh_3055_j14r 2012 3' Shoot with heat shock treatment 75bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 55 7.94019e-06
whvh_4022_l08f 2012 5' Shoot with heat shock treatment 336bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 115 4.87647e-24
whvh_4022_l08r 2012 3' Shoot with heat shock treatment 322bp Contig2710       hypotheticalprotein[Camelliasinensis] 125 8.15982e-27
whvh_10082_o23f 2012 5' Shoot with heat shock treatment 449bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 267 5.18316e-70
whvh_10082_o23r 2012 3' Shoot with heat shock treatment 488bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 206 2.13318e-51
whxe_39064_b15f 2012 5' Seedling, infected with leaf rust 282bp Contig2710       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 188 7.68774e-46
whxe_35064_b16f 2012 5' Seedling, infected with leaf rust 111bp Contig2710       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 84 1.61162e-14
whxe_3027_e06f 2012 5' Seedling, infected with leaf rust 123bp Contig2710       chloroplastchlorophyllA/Bbindingprotein[Heveabrasiliensis] 83 2.07954e-14
whxe_11058_g16f 2012 5' Seedling, infected with leaf rust 417bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 171 9.72417e-41
whxe_11058_g16r 2012 3' Seedling, infected with leaf rust 389bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 190 1.19049e-46
whxe_11010_h03f 2012 5' Seedling, infected with leaf rust 328bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 111 7.09498e-23
whxe_11010_h03r 2012 3' Seedling, infected with leaf rust 102bp Contig2710       chloroplastchlorophyllA/Bbindingprotein[Heveabrasiliensis] 74 1.67778e-11
whxe_30069_k17f 2012 5' Seedling, infected with leaf rust 580bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 328 7.13843e-88
whxe_30069_k17r 2012 3' Seedling, infected with leaf rust 543bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 297 1.11249e-78
whxe_31038_l11f 2012 5' Seedling, infected with leaf rust 620bp Contig2710       lightharvestingchlorophylla/b-bindingproteinLhcb1[Hordeumvulgaresubsp.vulgare] 421 9.66412e-116
whxe_31038_l11r 2012 3' Seedling, infected with leaf rust 563bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 309 4.12772e-82
whxe_37070_l19f 2012 5' Seedling, infected with leaf rust 429bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 266 2.94639e-69
whxe_37070_l19r 2012 3' Seedling, infected with leaf rust 602bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 334 1.4242e-89
whxe_10066_o20f 2012 5' Seedling, infected with leaf rust 340bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 108 7.72639e-22
whxe_10066_o20r 2012 3' Seedling, infected with leaf rust 322bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 124 1.39186e-26
whxf_14032_a08f 2012 5' Seedling, infected with leaf rust 48bp Contig2710            
whxf_15080_b19f 2012 5' Seedling, infected with leaf rust 597bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 384 1.18756e-104
whxf_15080_b19r 2012 3' Seedling, infected with leaf rust 601bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 338 5.69458e-91
whxf_31078_c19f 2012 5' Seedling, infected with leaf rust 559bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 356 2.8909e-96
whxf_20062_d16f 2012 5' Seedling, infected with leaf rust 596bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 380 1.71483e-103
whxf_20062_d16r 2012 3' Seedling, infected with leaf rust 400bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 209 2.51855e-52
whxf_1043_f09f 2012 5' Seedling, infected with leaf rust 159bp Contig2710       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 116 3.79513e-24
whxf_3076_f19f 2012 5' Seedling, infected with leaf rust 399bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 157 1.14042e-36
whxf_3076_f19r 2012 3' Seedling, infected with leaf rust 385bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 190 1.20009e-46
whxf_24025_h06f 2012 5' Seedling, infected with leaf rust 606bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 379 3.91902e-103
whxf_24025_h06r 2012 3' Seedling, infected with leaf rust 491bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 259 2.76051e-67
whxf_20056_i16f 2012 5' Seedling, infected with leaf rust 608bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 374 9.15614e-102
whxf_22022_k07f 2012 5' Seedling, infected with leaf rust 615bp Contig2710       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 423 2.47255e-116
whxf_22022_k07r 2012 3' Seedling, infected with leaf rust 410bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 209 2.48769e-52
whxf_22035_m10f 2012 5' Seedling, infected with leaf rust 553bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 354 7.94393e-96
whxf_22035_m10r 2012 3' Seedling, infected with leaf rust 404bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 209 2.50826e-52
whxf_11018_o07f 2012 5' Seedling, infected with leaf rust 250bp Contig2710       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 170 1.26727e-40
whxf_11018_o07r 2012 3' Seedling, infected with leaf rust 77bp Contig2710       chloroplastchlorophyllA/Bbindingprotein[Heveabrasiliensis] 53 2.31024e-05
whxg_8045_c09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 74bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 57 1.5359e-06
whxg_31011_e02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 388bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 239 2.23477e-61
whxg_31011_e02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 482bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 263 1.87972e-68
whxg_5044_e11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 567bp Contig2710       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 391 4.93016e-107
whxg_14025_g05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 399bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 157 1.14042e-36
whxg_14025_g05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 384bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 189 2.67353e-46
whxg_34042_g12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 483bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 323 1.99901e-86
whxg_29025_h06f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 563bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 356 2.94443e-96
whxg_29025_h06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 419bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 224 1.30026e-56
whxg_38026_h08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 512bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 323 1.55279e-86
whxg_27024_i07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 469bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 206 2.1352e-51
whxg_27024_i07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 428bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 224 1.28399e-56
whxg_10022_k08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 594bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 333 1.81234e-89
whxg_17005_l01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 601bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 326 2.23932e-87
whxg_17005_l01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 563bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 311 6.36816e-83
whxg_17005_l02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 210bp Contig2710       chlorophylla/bbindingprotein,partial[Loliumperenne] 76 2.50452e-12
whxg_40070_l20f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 401bp Contig2710       Unknown(proteinforIMAGE:5194336),partial[Homosapiens] 253 1.98633e-65
whxg_40070_l20r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 78bp Contig2710       chloroplastchlorophyllA/Bbindingprotein[Heveabrasiliensis] 52 3.94068e-05
whxg_27036_m12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 109bp Contig2710       unknown[Lotusjaponicus] 77 1.51296e-12
whxg_17065_p18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 320bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 113 1.88817e-23
whxg_20065_p18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 322bp Contig2710       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 115 4.95039e-24
whxg_17065_p18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 338bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 155 5.53253e-36
whxg_20065_p18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 328bp Contig2710       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 155 5.61672e-36
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