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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 58
First Previous 1-58 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_10014_c03f 2012 5' 264bp Contig26984       ThiFfamilyprotein[MethylophagathiooxidansDMS010] 36 3.81876
whr_5011_d13f 2012 5' Root 511bp Contig26984       wali3[Triticumaestivum] 189 3.4996e-46
whr_5010_d13r 2012 3' Root 112bp Contig26984       wali3[Triticumaestivum] 37 2.25249
whsc_9032_a08r 2012 3' Shoot grown with cold treatment 416bp Contig26984       wali3[Triticumaestivum] 165 6.96881e-39
whsc_9055_i14f 2012 5' Shoot grown with cold treatment 266bp Contig26984       ThiFfamilyprotein[MethylophagathiooxidansDMS010] 36 3.8054
whsc_9055_i14r 2012 3' Shoot grown with cold treatment 242bp Contig26984       wali3[Triticumaestivum] 41 0.117161
whsd_10056_j16f 2012 5' Shoot grown with dessication 542bp Contig26984       wali3[Triticumaestivum] 191 1.12286e-46
whsd_10056_j16r 2012 3' Shoot grown with dessication 528bp Contig26984       wali3[Triticumaestivum] 191 1.00828e-46
whsd_17022_k07f 2012 5' Shoot grown with dessication 539bp Contig26984       wali3[Triticumaestivum] 191 1.09995e-46
whsd_17022_k07r 2012 3' Shoot grown with dessication 532bp Contig26984       wali3[Triticumaestivum] 191 1.0312e-46
whvd_2072_i19f 2012 5' Shoot grown with dessication 509bp Contig26984       wali3[Triticumaestivum] 179 2.78593e-43
whxa_12019_m06f 2012 5' Root 410bp Contig26984       wali3[Triticumaestivum] 191 9.15618e-47
whxa_14084_m24f 2012 5' Root 294bp Contig26984       wali3[Triticumaestivum] 187 1.34051e-45
whxa_15084_m24f 2012 5' Root 519bp Contig26984       wali3[Triticumaestivum] 187 1.38978e-45
whxa_14084_m24r 2012 3' Root 521bp Contig26984       wali3[Triticumaestivum] 191 9.62452e-47
whxa_15084_m24r 2012 3' Root 501bp Contig26984       wali3[Triticumaestivum] 191 9.1058e-47
whxb_27021_k06f 2012 5' Root 299bp Contig26984       wali3[Triticumaestivum] 54 1.75839e-05
whxb_27021_k06r 2012 3' Root 343bp Contig26984       wali3[Triticumaestivum] 104 8.80948e-21
whxc_16076_e20f 2012 5' Root, treated at 50 microM Al for 6h 655bp Contig26984       wali3[Triticumaestivum] 191 1.86608e-46
whxc_23084_m23f 2012 5' Root, treated at 50 microM Al for 6h 352bp Contig26984       wali3[Triticumaestivum] 74 1.26043e-11
whxc_23084_m23r 2012 3' Root, treated at 50 microM Al for 6h 196bp Contig26984            
whxd_7025_g06f 2012 5' Root, treated at 50 microM Al for 6h 420bp Contig26984       wali3[Triticumaestivum] 123 2.39171e-26
whxd_7025_g06r 2012 3' Root, treated at 50 microM Al for 6h 389bp Contig26984       wali3[Triticumaestivum] 143 2.84673e-32
whxd_34041_g10f 2012 5' Root, treated at 50 microM Al for 6h 292bp Contig26984       ThiFfamilyprotein[MethylophagathiooxidansDMS010] 36 3.83562
whxd_26021_l05r 2012 3' Root, treated at 50 microM Al for 6h 609bp Contig26984       wali3[Triticumaestivum] 191 1.53619e-46
HX049383 whxm_4081_o22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 226bp Contig26984       wali3[Triticumaestivum] 135 6.06379e-30
HX049384 whxm_6081_o22f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 126bp Contig26984       wali3[Triticumaestivum] 77 1.94047e-12
HX049397 whxm_4081_o22r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 187bp Contig26984            
HX128993 whxr_30062_d16r 2012 3' Roots, 18 day old plants were grown hydroponically 328bp Contig26984       wali3[Triticumaestivum] 109 2.69609e-22
HX130553 whxr_16092_e24r 2012 3' Roots, 18 day old plants were grown hydroponically 258bp Contig26984       wali3[Triticumaestivum] 44 0.0141209
HX136573 whxr_4088_j24r 2012 3' Roots, 18 day old plants were grown hydroponically 535bp Contig26984       wali3[Triticumaestivum] 185 4.52502e-45
HX138174 whxr_16022_l08f 2012 5' Roots, 18 day old plants were grown hydroponically 557bp Contig26984       wali3[Triticumaestivum] 191 1.20879e-46
HX138198 whxr_16022_l08r 2012 3' Roots, 18 day old plants were grown hydroponically 538bp Contig26984       wali3[Triticumaestivum] 191 1.07703e-46
HX139933 whxr_7067_m18r 2012 3' Roots, 18 day old plants were grown hydroponically 298bp Contig26984       wali3[Triticumaestivum] 78 8.73827e-13
HX150580 whxs_26076_f20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 512bp Contig26984       wali3[Triticumaestivum] 184 1.12578e-44
HX150603 whxs_26076_f20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 473bp Contig26984       wali3[Triticumaestivum] 191 9.20114e-47
HX151075 whxs_11025_g06f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 538bp Contig26984       wali3[Triticumaestivum] 187 1.21613e-45
HX151096 whxs_11025_g06r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 507bp Contig26984       wali3[Triticumaestivum] 187 1.02779e-45
HX164428 whxt_9016_b03f 2012 5' Roots, 18 day old plants were grown hydroponically 557bp Contig26984       wali3[Triticumaestivum] 191 1.20879e-46
HX164456 whxt_9016_b03r 2012 3' Roots, 18 day old plants were grown hydroponically 531bp Contig26984       wali3[Triticumaestivum] 191 1.0312e-46
HX165883 whxt_28030_c07f 2012 5' Roots, 18 day old plants were grown hydroponically 557bp Contig26984       wali3[Triticumaestivum] 191 1.20879e-46
HX165911 whxt_28030_c07r 2012 3' Roots, 18 day old plants were grown hydroponically 522bp Contig26984       wali3[Triticumaestivum] 191 9.62452e-47
HX169221 whxt_28092_e23r 2012 3' Roots, 18 day old plants were grown hydroponically 531bp Contig26984       wali3[Triticumaestivum] 191 1.0312e-46
HX169383 whxt_12012_f03f 2012 5' Roots, 18 day old plants were grown hydroponically 540bp Contig26984       wali3[Triticumaestivum] 191 1.09995e-46
HX169407 whxt_12012_f03r 2012 3' Roots, 18 day old plants were grown hydroponically 530bp Contig26984       wali3[Triticumaestivum] 191 1.0312e-46
HX177100 whxt_13037_l09f 2012 5' Roots, 18 day old plants were grown hydroponically 482bp Contig26984       wali3[Triticumaestivum] 168 8.22962e-40
HX177126 whxt_13037_l09r 2012 3' Roots, 18 day old plants were grown hydroponically 460bp Contig26984       wali3[Triticumaestivum] 185 3.83128e-45
HX179784 whxt_20051_n14f 2012 5' Roots, 18 day old plants were grown hydroponically 536bp Contig26984       wali3[Triticumaestivum] 191 1.07703e-46
HX179810 whxt_20051_n14r 2012 3' Roots, 18 day old plants were grown hydroponically 524bp Contig26984       wali3[Triticumaestivum] 191 9.85368e-47
HX181743 whxt_11002_p04f 2012 5' Roots, 18 day old plants were grown hydroponically 540bp Contig26984       wali3[Triticumaestivum] 191 1.09995e-46
HX181769 whxt_11002_p04r 2012 3' Roots, 18 day old plants were grown hydroponically 529bp Contig26984       wali3[Triticumaestivum] 191 1.0312e-46
HX184844 whxu_21080_b19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 504bp Contig26984       wali3[Triticumaestivum] 185 5.10089e-45
HX187295 whxu_2078_d20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 603bp Contig26984       wali6[Triticumaestivum] 131 4.03881e-38
HX191675 whxu_25057_h13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 538bp Contig26984       wali3[Triticumaestivum] 191 1.07703e-46
HX191699 whxu_25057_h13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 523bp Contig26984       wali3[Triticumaestivum] 191 9.62452e-47
HX199736 whxu_14018_o08f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 540bp Contig26984       wali3[Triticumaestivum] 191 1.09995e-46
HX199760 whxu_14018_o08r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 507bp Contig26984       wali3[Triticumaestivum] 191 9.29601e-47
whxw_9017_o05r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 501bp Contig26984       wali3[Triticumaestivum] 191 9.1058e-47
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