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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 36
First Previous 1-36 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_2075_f18f 2012 5' Seed DPA20 256bp Contig26331            
whkv_3038_k11r 2012 3' Shoot grown with continuous light after cold treatment 340bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.2618e-56
whms_4066_p20f 2012 5' Seed DPA5 of DT3DL CS wheat 627bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.34867e-96
whr_17005_i19f 2012 5' Root 553bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 9.31033e-76
whr_17005_i19r 2012 3' Root 461bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 1.14851e-41
whrd_12025_g06f 2012 5' Root of dessiccated seed 677bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.92098e-106
whrd_12025_g06r 2012 3' Root of dessiccated seed 634bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.45506e-79
whrd_20037_l10f 2012 5' Root of dessiccated seed 465bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 141 8.47282e-32
whrd_20037_l10r 2012 3' Root of dessiccated seed 455bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 9.8084e-41
whxb_6043_e09f 2012 5' Root 240bp Contig26331            
whxb_5053_k14f 2012 5' Root 669bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.74721e-106
whxb_5053_k14r 2012 3' Root 278bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00277607
whxd_18075_e17f 2012 5' Root, treated at 50 microM Al for 6h 538bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 5.58402e-83
whxd_18075_e17r 2012 3' Root, treated at 50 microM Al for 6h 634bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.45506e-79
whxf_12071_j18f 2012 5' Seedling, infected with leaf rust 673bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 2.36266e-108
whxf_12071_j18r 2012 3' Seedling, infected with leaf rust 640bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.51368e-79
whxh_37088_i24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 552bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 3.0257e-87
HX010053 whxj_1016_a03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 304bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 2.41889e-31
HX010063 whxj_1016_a03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 358bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 9.81833e-41
HX013044 whxj_17011_f01r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 367bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.50402e-25
HX091079 whxp_26059_e14f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 298bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 1.74215e-37
HX092876 whxp_20091_f21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 579bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.8396e-90
HX092908 whxp_20091_f21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 578bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 3.38995e-66
HX144350 whxs_7063_a13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 723bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.60965e-116
HX144375 whxs_7063_a13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 689bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 4.42794e-89
HX144982 whxs_28015_b02f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 683bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 406 3.0835e-111
HX145009 whxs_28015_b02r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 788bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.79109e-107
HX161238 whxs_23049_o13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 721bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 8.91475e-83
HX161264 whxs_23049_o13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 690bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 4.47555e-89
HX181062 whxt_15050_o15f 2012 5' Roots, 18 day old plants were grown hydroponically 734bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.8032e-86
HX181090 whxt_15050_o15r 2012 3' Roots, 18 day old plants were grown hydroponically 720bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 4.98976e-94
HX186228 whxu_5093_c22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 781bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 1.50682e-105
HX196183 whxu_14022_l07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 75bp Contig26331            
HX200507 whxu_29082_o23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 710bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.69732e-92
whxx_3057_h14f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 653bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 406 2.79197e-111
whxx_3057_h14r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 714bp Contig26331       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 3.17085e-93
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