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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 181
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9044_f12f 2012 5' Callus 581bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.45512e-48
whcs_13081_p22f 2012 5' Callus 579bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.43087e-48
whcs_13081_p22r 2012 3' Callus 510bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.83949e-49
whdl_12084_f12f 2012 5' Crown of seedling 541bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.17519e-48
whdp_15031_b05f 2012 5' Seed DPA20 556bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.26711e-48
whdp_15031_b05r 2012 3' Seed DPA20 511bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.83949e-49
whdp_9005_k02f 2012 5' Seed DPA20 601bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.59301e-48
whdp_9005_k02r 2012 3' Seed DPA20 543bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.55876e-48
whdp_20003_n02f 2012 5' Seed DPA20 522bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.02829e-48
whdp_20003_n02r 2012 3' Seed DPA20 479bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.74275e-49
whe_14066_a11f 2012 5' Seed DPA10 406bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 175 3.99734e-42
whe_6039_m03f 2012 5' Seed DPA10 489bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 175 4.03234e-42
whe_6039_m03r 2012 3' Seed DPA10 498bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.72871e-49
whei_3015_a01f 2012 5' Dormant seed with water absorption after breaking 455bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.78567e-49
whei_3015_a01r 2012 3' Dormant seed with water absorption after breaking 526bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.07726e-48
whem_11035_m09f 2012 5' Dormant seed with water absorption 419bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.97884e-49
whem_11035_m09r 2012 3' Dormant seed with water absorption 520bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.02829e-48
whh_3016_p13f 2012 5' Spike at heading date 511bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.83949e-49
whh_3016_p13r 2012 3' Spike at heading date 369bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 2.23706e-37
whhg_19048_b12f 2012 5' Anther at meiosis of MT4B CS wheat 519bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 3.92595e-48
whhg_19048_b12r 2012 3' Anther at meiosis of MT4B CS wheat 505bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.93194e-49
whhg_19096_b24f 2012 5' Anther at meiosis of MT4B CS wheat 60bp Contig26260       PREDICTED:mitochondrialmetalloendopeptidaseOMA1-like[Brachypodiumdistachyon] 42 0.0326237
whhg_19096_b24r 2012 3' Anther at meiosis of MT4B CS wheat 198bp Contig26260       PREDICTED:uncharacterizedproteinLOC100839580[Brachypodiumdistachyon] 121 1.17726e-25
whhg_19044_f12f 2012 5' Anther at meiosis of MT4B CS wheat 581bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.45512e-48
whhg_19044_f12r 2012 3' Anther at meiosis of MT4B CS wheat 512bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.83949e-49
whkp_20028_e07f 2012 5' Shoot grown under continuous light 618bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.71369e-48
whkp_20028_e07r 2012 3' Shoot grown under continuous light 542bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19967e-48
whkp_19076_f20f 2012 5' Shoot grown under continuous light 615bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.68955e-48
whkp_19076_f20r 2012 3' Shoot grown under continuous light 568bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.35811e-48
whkv_11006_l04f 2012 5' Shoot grown with continuous light after cold treatment 597bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.57638e-48
whkv_11006_l04r 2012 3' Shoot grown with continuous light after cold treatment 532bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.12622e-48
whms_17016_b04f 2012 5' Seed DPA5 of DT3DL CS wheat 567bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.35811e-48
whms_17016_b04r 2012 3' Seed DPA5 of DT3DL CS wheat 505bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.93194e-49
whms_1031_b05f 2012 5' Seed DPA5 of DT3DL CS wheat 565bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.36458e-48
whms_1031_b05r 2012 3' Seed DPA5 of DT3DL CS wheat 526bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.07726e-48
whms_10096_b23f 2012 5' Seed DPA5 of DT3DL CS wheat 546bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19401e-48
whms_10096_b23r 2012 3' Seed DPA5 of DT3DL CS wheat 501bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.68364e-49
whms_4044_f12f 2012 5' Seed DPA5 of DT3DL CS wheat 601bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.56887e-48
whms_4044_f12r 2012 3' Seed DPA5 of DT3DL CS wheat 516bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.00855e-48
whms_8090_h24f 2012 5' Seed DPA5 of DT3DL CS wheat 522bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.02829e-48
whms_8090_h24r 2012 3' Seed DPA5 of DT3DL CS wheat 469bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.87449e-49
whms_10086_l24f 2012 5' Seed DPA5 of DT3DL CS wheat 545bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19401e-48
whms_10086_l24r 2012 3' Seed DPA5 of DT3DL CS wheat 501bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.68364e-49
whms_3034_o11f 2012 5' Seed DPA5 of DT3DL CS wheat 546bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19401e-48
whms_3034_o11r 2012 3' Seed DPA5 of DT3DL CS wheat 498bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.77378e-49
whoh_1101_p06r 2012 3' Pistil at heading date 149bp Contig26260            
whok_7021_k05f 2012 5' Seed DPA5 555bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.82971e-47
whok_7021_k05r 2012 3' Seed DPA5 530bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.10174e-48
whok_8085_l21f 2012 5' Seed DPA5 543bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.55876e-48
whok_8085_l21r 2012 3' Seed DPA5 497bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 3.71403e-48
whok_14017_p06f 2012 5' Seed DPA5 543bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19967e-48
whok_14017_p06r 2012 3' Seed DPA5 502bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.68364e-49
whr_13049_n15f 2012 5' Root 391bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.38907e-47
whrd_6047_b10f 2012 5' Root of dessiccated seed 567bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.36458e-48
whrd_6047_b10r 2012 3' Root of dessiccated seed 527bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.07726e-48
whrd_11061_c13f 2012 5' Root of dessiccated seed 610bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.64128e-48
whrd_11061_c13r 2012 3' Root of dessiccated seed 544bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19967e-48
whrd_8069_k17f 2012 5' Root of dessiccated seed 596bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.57638e-48
whrd_8069_k17r 2012 3' Root of dessiccated seed 479bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.74275e-49
whsc_17070_l20f 2012 5' Shoot grown with cold treatment 448bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 1.16876e-41
whsc_17070_l20r 2012 3' Shoot grown with cold treatment 414bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.92109e-45
whsh_2094_l24f 2012 5' - 370bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 3.3351e-41
whsh_2094_l24r 2012 3' - 342bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 2.08951e-43
whsl_9049_a16f 2012 5' Seed DPA30 588bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.50363e-48
whsl_9049_a16r 2012 3' Seed DPA30 528bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.10174e-48
whsl_31012_h01f 2012 5' Seed DPA30 418bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.97884e-49
whsl_31012_h01r 2012 3' Seed DPA30 518bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.03315e-48
whsl_32013_h01r 2012 3' Seed DPA30 86bp Contig26260       PREDICTED:mitochondrialmetalloendopeptidaseOMA1-like[Brachypodiumdistachyon] 52 3.90619e-05
whsl_25053_i22f 2012 5' Seed DPA30 603bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.59301e-48
whsl_28040_n03f 2012 5' Seed DPA30 568bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.35811e-48
whsl_28049_n03r 2012 3' Seed DPA30 524bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.05278e-48
whsl_7072_n05r 2012 3' Seed DPA30 56bp Contig26260       PREDICTED:mitochondrialmetalloendopeptidaseOMA1-like[Brachypodiumdistachyon] 42 0.0293613
whsp_8063_a13f 2012 5' 485bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 1.17857e-41
whsp_8063_a13r 2012 3' 482bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.69883e-49
whsp_6064_a15f 2012 5' 599bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.56887e-48
whsp_6064_a15r 2012 3' 540bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.17519e-48
whsp_11072_i19f 2012 5' 511bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.83949e-49
whsp_11072_i19r 2012 3' 489bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.90899e-49
whsp_16086_l24f 2012 5' 370bp Contig26260       PREDICTED:mitochondrialmetalloendopeptidaseOMA1-like[Brachypodiumdistachyon] 44 0.0108062
whsp_16086_l24r 2012 3' 395bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 97 1.83661e-18
whsp_10067_m18f 2012 5' 418bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.03894e-42
whsp_10067_m18r 2012 3' 349bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 164 9.33279e-39
whsp_9019_n05f 2012 5' 404bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 149 4.02312e-34
whsp_9019_n05r 2012 3' 377bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 3.76046e-48
whsp_14081_p22f 2012 5' 544bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19401e-48
whsp_14081_p22r 2012 3' 499bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.77378e-49
whv_1615091_f22f 2012 5' Shoot grown under cold condition for 16days 308bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 2.95975e-13
whv_1615091_f22r 2012 3' Shoot grown under cold condition for 16days 282bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 1.89996e-20
whv3_18077_c17f 2012 5' Shoot grown under cold condition for 3days 584bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.47937e-48
whv3_17077_c17r 2012 3' Shoot grown under cold condition for 3days 542bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.19967e-48
whva_20012_f04f 2012 5' Shoot with ABA treatment 554bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.26711e-48
whva_20012_f04r 2012 3' Shoot with ABA treatment 534bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.15071e-48
whva_7096_p12r 2012 3' Shoot with ABA treatment 48bp Contig26260            
whvd_11084_n23f 2012 5' Shoot grown with dessication 597bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.57638e-48
whvd_12084_n23f 2012 5' Shoot grown with dessication 595bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.55213e-48
whvd_11084_n23r 2012 3' Shoot grown with dessication 564bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.36458e-48
whvh_5013_c01f 2012 5' Shoot with heat shock treatment 505bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.93194e-49
whvh_5013_c01r 2012 3' Shoot with heat shock treatment 482bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.69883e-49
whvh_5013_c02f 2012 5' Shoot with heat shock treatment 370bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 5.48593e-39
whxa_9037_l09f 2012 5' Root 121bp Contig26260       PREDICTED:mitochondrialmetalloendopeptidaseOMA1-like[Brachypodiumdistachyon] 41 0.118718
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