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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 98
First Previous 1-98 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_4043_f09r 2012 3' Callus 692bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 363 3.09224e-98
whdp_6064_b15f 2012 5' Seed DPA20 96bp Contig26173       ubiquitin/40sribosomalproteinS27afusion[StereumhirsutumFP-91666SS1] 66 3.38393e-09
whdp_6050_p15f 2012 5' Seed DPA20 508bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 307 6.81458e-82
whdp_6050_p15r 2012 3' Seed DPA20 529bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 266 2.46627e-69
whdp_3082_p24f 2012 5' Seed DPA20 489bp Contig26173       unknown[Medicagotruncatula] 309 1.78917e-82
whdp_3082_p24r 2012 3' Seed DPA20 533bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 259 4.11644e-67
whe_6019_e20f 2012 5' Seed DPA10 519bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 259 3.77623e-67
whe_24022_j02f 2012 5' Seed DPA10 534bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 328 7.37268e-88
whe_24022_j02r 2012 3' Seed DPA10 415bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 170 1.66561e-40
whf_1047_l21f 2012 5' Spike at flowering date 518bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 316 1.99306e-84
whf_1047_l21r 2012 3' Spike at flowering date 444bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 217 1.21431e-54
whh_27029_h14f 2012 5' Spike at heading date 426bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 253 1.98467e-65
whhg_14058_h16f 2012 5' Anther at meiosis of MT4B CS wheat 606bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 358 5.48123e-97
whhg_14058_h16r 2012 3' Anther at meiosis of MT4B CS wheat 693bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 357 1.69677e-96
whhg_10087_i22f 2012 5' Anther at meiosis of MT4B CS wheat 726bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 351 1.02512e-94
whhg_10087_i22r 2012 3' Anther at meiosis of MT4B CS wheat 691bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 361 8.99704e-98
whhg_7040_j12f 2012 5' Anther at meiosis of MT4B CS wheat 750bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 445 9.58195e-123
whhg_7040_j12r 2012 3' Anther at meiosis of MT4B CS wheat 751bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 393 4.32114e-107
whhg_19003_m02f 2012 5' Anther at meiosis of MT4B CS wheat 605bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 367 1.54111e-99
whhg_19003_m02r 2012 3' Anther at meiosis of MT4B CS wheat 660bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 341 8.65147e-92
whkp_7079_b17f 2012 5' Shoot grown under continuous light 760bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 430 3.30371e-118
whkp_7079_b17r 2012 3' Shoot grown under continuous light 690bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 361 8.90132e-98
whkp_2023_j05f 2012 5' Shoot grown under continuous light 782bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 440 3.34131e-121
whkp_2023_j05r 2012 3' Shoot grown under continuous light 662bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 341 8.75447e-92
whms_7068_n20f 2012 5' Seed DPA5 of DT3DL CS wheat 588bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 353 2.14123e-95
whms_7068_n20r 2012 3' Seed DPA5 of DT3DL CS wheat 573bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 282 3.26744e-74
whoh_6050_a04f 2012 5' Pistil at heading date 516bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 311 8.17425e-83
whoh_6050_a04r 2012 3' Pistil at heading date 562bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 268 8.07444e-70
whoh_16079_o23f 2012 5' Pistil at heading date 518bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 312 2.20359e-83
whoh_16079_o23r 2012 3' Pistil at heading date 375bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 148 9.02784e-34
whok_17093_d22f 2012 5' Seed DPA5 607bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 361 1.12091e-97
whok_17093_d22r 2012 3' Seed DPA5 673bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.18017e-97
whok_16012_e04f 2012 5' Seed DPA5 739bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 440 2.2969e-121
whok_16012_e04r 2012 3' Seed DPA5 702bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 350 2.79539e-94
whok_16060_e15f 2012 5' Seed DPA5 285bp Contig26173       unknown[Medicagotruncatula] 177 1.35216e-42
whok_2026_g07f 2012 5' Seed DPA5 663bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 399 3.53782e-109
whok_2026_g07r 2012 3' Seed DPA5 687bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 358 1.28535e-96
whok_6068_m20f 2012 5' Seed DPA5 527bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 284 6.70073e-75
whok_6068_m20r 2012 3' Seed DPA5 504bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 301 4.76156e-80
whok_4001_p01f 2012 5' Seed DPA5 671bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 406 2.25718e-111
whok_4001_p01r 2012 3' Seed DPA5 690bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 361 8.90132e-98
whpc_6031_a05f 2012 5' Anther at meiosis 664bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 399 3.53782e-109
whpc_6031_a05r 2012 3' Anther at meiosis 719bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.82178e-97
whpc_7080_a19f 2012 5' Anther at meiosis 700bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 423 2.57148e-116
whpc_7080_a19r 2012 3' Anther at meiosis 762bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 401 1.63544e-109
whpc_20087_j22f 2012 5' Anther at meiosis 793bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 449 4.32067e-124
whpc_20087_j22r 2012 3' Anther at meiosis 718bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.7745e-97
whpc_13066_o19f 2012 5' Anther at meiosis 791bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 452 8.70586e-125
whpc_13066_o19r 2012 3' Anther at meiosis 687bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.37018e-97
whrd_17062_c16f 2012 5' Root of dessiccated seed 47bp Contig26173            
whrd_1092_f24r 2012 3' Root of dessiccated seed 175bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 101 7.26683e-20
whsd_14032_a07f 2012 5' Shoot grown with dessication 585bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 347 1.15598e-93
whsd_13034_o11f 2012 5' Shoot grown with dessication 602bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 355 5.96976e-96
whsd_13034_o11r 2012 3' Shoot grown with dessication 633bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 304 1.78493e-80
whsp_8034_p11r 2012 3' 650bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 334 1.0198e-89
whv3_7066_o20f 2012 5' Shoot grown under cold condition for 3days 772bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 440 3.25915e-121
whv3_7066_o20r 2012 3' Shoot grown under cold condition for 3days 648bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 331 8.63312e-89
whva_1022_j08f 2012 5' Shoot with ABA treatment 232bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 131 8.69711e-29
whva_1022_j08r 2012 3' Shoot with ABA treatment 557bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 265 6.58686e-69
whvd_15009_g02f 2012 5' Shoot grown with dessication 735bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 445 9.15418e-123
whvd_15009_g02r 2012 3' Shoot grown with dessication 631bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 304 1.79352e-80
whvs_11007_j02f 2012 5' Liquid cultured tissue 605bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 367 1.54111e-99
whvs_11007_j02r 2012 3' Liquid cultured tissue 641bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 332 4.87376e-89
whxa_6052_n16f 2012 5' Root 343bp Contig26173       unknown[Medicagotruncatula] 218 7.14007e-55
whxa_6052_n16r 2012 3' Root 596bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 309 3.7174e-82
whxb_29078_d19f 2012 5' Root 40bp Contig26173       hypotheticalproteinLEMA_P110940.1[LeptosphaeriamaculansJN3] 29 0.991677
whxb_27078_d19r 2012 3' Root 323bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 120 2.00983e-25
whxc_34044_f12f 2012 5' Root, treated at 50 microM Al for 6h 363bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 214 1.0074e-53
whxc_34044_f12r 2012 3' Root, treated at 50 microM Al for 6h 508bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 244 1.20285e-62
whxd_27094_d23f 2012 5' Root, treated at 50 microM Al for 6h 312bp Contig26173       unknown[Medicagotruncatula] 201 6.71987e-50
whxd_27094_d23r 2012 3' Root, treated at 50 microM Al for 6h 524bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 326 2.56318e-87
whxd_20023_j06r 2012 3' Root, treated at 50 microM Al for 6h 574bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 282 3.26744e-74
whxd_10019_m06r 2012 3' Root, treated at 50 microM Al for 6h 64bp Contig26173       ubiquitin/40sribosomalproteinS27afusion[StereumhirsutumFP-91666SS1] 42 0.0426079
whxd_10019_n06f 2012 5' Root, treated at 50 microM Al for 6h 571bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 278 6.16213e-73
whxd_10019_n06r 2012 3' Root, treated at 50 microM Al for 6h 597bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 301 7.75126e-80
whxd_24001_o01f 2012 5' Root, treated at 50 microM Al for 6h 43bp Contig26173            
whxd_24001_o01r 2012 3' Root, treated at 50 microM Al for 6h 528bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 250 1.43226e-64
whxh_37011_f01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 469bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 249 2.85974e-64
whxh_38011_f01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 186bp Contig26173       unknown[Medicagotruncatula] 118 7.73055e-25
whxh_37011_f01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 464bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 276 1.68753e-72
HX027374 whxk_2038_l11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 454bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 271 5.35565e-71
HX027385 whxk_2038_l11r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 280bp Contig26173       ribosomalproteinL40[Heliconiusmelpomenecythera] 100 2.10819e-19
HX029366 whxk_12049_o14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 307bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 115 6.35691e-24
HX029367 whxk_13049_o14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 306bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 117 1.67287e-24
HX134058 whxr_3089_h22f 2012 5' Roots, 18 day old plants were grown hydroponically 767bp Contig26173       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 451 1.06425e-124
HX134083 whxr_3089_h22r 2012 3' Roots, 18 day old plants were grown hydroponically 764bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 401 1.63544e-109
HX155509 whxs_27087_j21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 792bp Contig26173       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 447 2.82298e-123
HX160212 whxs_28067_n17f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 657bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 399 3.45458e-109
HX160240 whxs_28067_n17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 689bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.41768e-97
HX160574 whxs_26084_n24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 567bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 356 1.75757e-96
HX160600 whxs_26084_n24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 469bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 257 1.37759e-66
HX164931 whxt_24063_b13f 2012 5' Roots, 18 day old plants were grown hydroponically 794bp Contig26173       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 447 2.82298e-123
HX164958 whxt_24063_b13r 2012 3' Roots, 18 day old plants were grown hydroponically 688bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.37018e-97
HX166969 whxt_9014_d04f 2012 5' Roots, 18 day old plants were grown hydroponically 859bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 434 2.19836e-119
HX166994 whxt_9014_d04r 2012 3' Roots, 18 day old plants were grown hydroponically 727bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 361 1.00013e-97
HX182734 whxt_14082_p23f 2012 5' Roots, 18 day old plants were grown hydroponically 752bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 421 1.49494e-115
HX182756 whxt_14082_p23r 2012 3' Roots, 18 day old plants were grown hydroponically 724bp Contig26173       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.86905e-97
whyd_3037_i15f 2012 5' Spikelet at late flowering 500bp Contig26173       Ubiquitin-likeprotein[Medicagotruncatula] 316 1.87678e-84
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