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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_13037_k09f 2012 5' Callus 339bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.19461e-10
whcs_13037_k09r 2012 3' Callus 304bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 9.55622e-12
whem_12043_e10f 2012 5' Dormant seed with water absorption 383bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 1.56012e-62
whem_12043_e10r 2012 3' Dormant seed with water absorption 625bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.90462e-68
whem_8022_k07f 2012 5' Dormant seed with water absorption 316bp Contig24938            
whem_8022_k07r 2012 3' Dormant seed with water absorption 295bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 36 4.97341
whr_22024_m20r 2012 3' Root 41bp Contig24938            
whsc_14015_b02f 2012 5' Shoot grown with cold treatment 555bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 8.77505e-50
whv3_4006_k03f 2012 5' Shoot grown under cold condition for 3days 669bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 422 5.19159e-116
whxb_3055_i14f 2012 5' Root 669bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 387 1.85972e-105
whxb_3055_i14r 2012 3' Root 572bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.33273e-59
whxc_19015_a01f 2012 5' Root, treated at 50 microM Al for 6h 439bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 2.57313e-17
whxc_21015_a01f 2012 5' Root, treated at 50 microM Al for 6h 446bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.18571e-19
whxc_21015_a01r 2012 3' Root, treated at 50 microM Al for 6h 425bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.6223e-25
whxe_29058_g15f 2012 5' Seedling, infected with leaf rust 631bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 4.68706e-105
whxe_24040_j12f 2012 5' Seedling, infected with leaf rust 480bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 7.39087e-81
whxe_24040_j12r 2012 3' Seedling, infected with leaf rust 574bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 4.58054e-60
HX060506 whxn_40058_h16f 2012 5' Leaves, plant was grown at constant 23℃ 412bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.24765e-10
HX060534 whxn_40058_h16r 2012 3' Leaves, plant was grown at constant 23℃ 382bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.52428e-14
HX130441 whxr_14091_e22f 2012 5' Roots, 18 day old plants were grown hydroponically 674bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 1.58111e-112
HX130458 whxr_14091_e22r 2012 3' Roots, 18 day old plants were grown hydroponically 736bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 3.43247e-85
HX151814 whxs_16089_g21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 792bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 472 4.766e-131
HX151839 whxs_16089_g21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 750bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.34951e-92
HX159688 whxs_1020_n07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 428bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 6.65586e-21
HX162641 whxs_30050_p16f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 467bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 4.33233e-28
HX162667 whxs_30050_p16r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 450bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.38382e-34
HX164307 whxt_19015_b01f 2012 5' Roots, 18 day old plants were grown hydroponically 620bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 392 3.68089e-107
HX168143 whxt_8012_e03f 2012 5' Roots, 18 day old plants were grown hydroponically 717bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 9.88642e-119
HX170993 whxt_20041_g10f 2012 5' Roots, 18 day old plants were grown hydroponically 717bp Contig24938       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 9.9843e-119
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