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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 22
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_3059_e13r 2012 3' Callus 728bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 272 6.10994e-71
whcs_9053_l13f 2012 5' Callus 102bp Contig24692       hypotheticalproteinSORBIDRAFT_01g043220[Sorghumbicolor] 66 2.67862e-09
whcs_9053_l13r 2012 3' Callus 78bp Contig24692       PREDICTED:LOWQUALITYPROTEIN:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 57 2.08343e-06
whe_1017_a14r 2012 3' Seed DPA10 561bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 225 6.00203e-57
whem_15050_p15f 2012 5' Dormant seed with water absorption 503bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 88 6.33525e-16
whem_15050_p15r 2012 3' Dormant seed with water absorption 454bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 100 1.62802e-19
whhg_15056_j15f 2012 5' Anther at meiosis of MT4B CS wheat 507bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 88 6.4977e-16
whhg_15056_j15r 2012 3' Anther at meiosis of MT4B CS wheat 478bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 111 7.06256e-23
whrd_6085_l22r 2012 3' Root of dessiccated seed 619bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 225 7.67458e-57
whsc_12039_i09f 2012 5' Shoot grown with cold treatment 606bp Contig24692       LOC100285961[Zeamays] 378 8.73066e-103
whsc_12039_i09r 2012 3' Shoot grown with cold treatment 310bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 157 1.45872e-36
whxa_27042_g11r 2012 3' Root 604bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 200 1.88176e-49
whxc_14010_g04f 2012 5' Root, treated at 50 microM Al for 6h 599bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 386 2.38144e-105
whxc_14010_g04r 2012 3' Root, treated at 50 microM Al for 6h 607bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 249 3.58595e-64
HX150079 whxs_24043_f10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 628bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 153 3.86293e-35
HX150103 whxs_24043_f10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 598bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 176 4.91171e-42
HX197144 whxu_28004_m03f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 824bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 488 1.17811e-135
HX197168 whxu_28004_m03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 773bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 311 1.33863e-82
whxv_10015_a01f 2012 5' Leaves, plant was grown at constant 23℃ 747bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 379 6.45709e-103
whxx_7047_b10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 750bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 438 1.17131e-120
whxx_7047_b10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 784bp Contig24692       PREDICTED:T-complexprotein1subunitgamma-like[Brachypodiumdistachyon] 308 1.16179e-81
whyd_24009_c07f 2012 5' Spikelet at late flowering 491bp Contig24692       hypotheticalproteinOsJ_21589[OryzasativaJaponicaGroup] 302 2.17716e-80
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