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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 70
First Previous 1-70 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_2015_a01f 2012 5' Callus 401bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.55533e-14
whcs_2015_a01r 2012 3' Callus 369bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 7.99352e-19
whe_18028_h02f 2012 5' Seed DPA10 389bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.21953e-68
whf_6095_o12r 2012 3' Spike at flowering date 97bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.755611
whh_1017_a08r 2012 3' Spike at heading date 176bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.35298
whh_1047_o09r 2012 3' Spike at heading date 220bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.59773
whhg_5044_e12r 2012 3' Anther at meiosis of MT4B CS wheat 592bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.82499e-65
whoh_20064_o16r 2012 3' Pistil at heading date 354bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.15096e-19
whok_2090_g23f 2012 5' Seed DPA5 399bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.94694e-13
whok_2090_g23r 2012 3' Seed DPA5 365bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.51345e-17
whok_2090_g24f 2012 5' Seed DPA5 232bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.48265
whok_2090_g24r 2012 3' Seed DPA5 76bp Contig24338            
whpc_14032_b08f 2012 5' Anther at meiosis 210bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.38458
whpc_14032_b08r 2012 3' Anther at meiosis 174bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 6.39565
whpc_19072_j19f 2012 5' Anther at meiosis 48bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.642839
whpc_19072_j19r 2012 3' Anther at meiosis 537bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 6.96493e-54
whrd_14067_m18f 2012 5' Root of dessiccated seed 546bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 2.38917e-73
whrd_14067_m18r 2012 3' Root of dessiccated seed 605bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.60593e-72
whrd_14019_n05r 2012 3' Root of dessiccated seed 65bp Contig24338            
whsc_10050_p15f 2012 5' Shoot grown with cold treatment 540bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 8.71539e-44
whsc_10050_p15r 2012 3' Shoot grown with cold treatment 541bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.02832e-53
whsp_9030_d08r 2012 3' 411bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.60977e-29
whsp_4051_m14f 2012 5' 543bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 1.3172e-71
whsp_4051_m14r 2012 3' 575bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 6.08732e-60
whsp_4003_n01f 2012 5' 623bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 4.76501e-70
whsp_4003_n01r 2012 3' 630bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 5.75526e-71
whxa_25030_c08f 2012 5' Root 370bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 4.23957e-07
whxa_25030_c08r 2012 3' Root 337bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 4.13165e-07
whxa_22065_o18f 2012 5' Root 565bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 2.73048e-73
whxa_22065_o18r 2012 3' Root 619bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.7859e-69
whxb_1079_a18f 2012 5' Root 541bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 8.89696e-44
whxb_1079_a18r 2012 3' Root 287bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00284817
whxb_24013_c02f 2012 5' Root 176bp Contig24338       conservedhypotheticalprotein[FaecalibacteriumprausnitziiA2-165] 36 4.89698
whxb_25013_c02f 2012 5' Root 176bp Contig24338       conservedhypotheticalprotein[FaecalibacteriumprausnitziiA2-165] 36 4.89698
whxb_24013_c02r 2012 3' Root 156bp Contig24338            
whxb_25013_c02r 2012 3' Root 156bp Contig24338            
whxb_26003_m02f 2012 5' Root 659bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.45677e-70
whxb_26003_m02r 2012 3' Root 619bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 2.75524e-70
whxb_13067_m17r 2012 3' Root 72bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 54 1.30022e-05
whxb_2067_n18f 2012 5' Root 402bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 8.71657e-29
whxb_2067_n18r 2012 3' Root 360bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.79348e-34
whxb_30034_o12f 2012 5' Root 256bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.56683
whxb_30034_o12r 2012 3' Root 223bp Contig24338       predictedprotein[Populustrichocarpa] 36 3.84643
whxc_30015_a02f 2012 5' Root, treated at 50 microM Al for 6h 208bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.38458
whxc_30015_a02r 2012 3' Root, treated at 50 microM Al for 6h 180bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.3262
whxc_8014_d03r 2012 3' Root, treated at 50 microM Al for 6h 163bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 9.2889e-23
whxc_28074_g20r 2012 3' Root, treated at 50 microM Al for 6h 441bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 4.63581e-38
whxc_11071_i18f 2012 5' Root, treated at 50 microM Al for 6h 68bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 45 0.00553642
whxc_11071_i18r 2012 3' Root, treated at 50 microM Al for 6h 173bp Contig24338            
whxc_24034_p12f 2012 5' Root, treated at 50 microM Al for 6h 40bp Contig24338            
whxc_24034_p12r 2012 3' Root, treated at 50 microM Al for 6h 269bp Contig24338       hypotheticalproteinBRAFLDRAFT_144915[Branchiostomafloridae] 37 1.70217
whxe_36029_c05r 2012 3' Seedling, infected with leaf rust 612bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 2.26766e-69
whxg_7060_f15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 586bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.00869e-73
whxg_7060_f15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 209bp Contig24338       hypotheticalproteinLOAG_06326[Loaloa] 35 8.38458
HX008514 whxi_20036_n12r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 364bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.02501e-19
HX021174 whxk_3013_c02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 50bp Contig24338            
HX040896 whxm_1016_b04r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 364bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 6.79358e-18
HX110201 whxq_4094_c23r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 70bp Contig24338            
HX147561 whxs_17030_d07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 756bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 5.42667e-73
HX147585 whxs_17030_d07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 673bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 4.20936e-73
HX147942 whxs_15062_d15f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 604bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.48755e-54
HX147965 whxs_15062_d15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 585bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 247 2.12632e-63
HX148931 whxs_28044_e11f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 752bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 5.37907e-73
HX148956 whxs_28044_e11r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 665bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 4.13358e-73
HX154988 whxs_11040_j11r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 677bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 4.70688e-72
whxx_1030_d07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 771bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 5.58979e-73
whxx_1030_d07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 669bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 4.18164e-73
whxy_7022_l07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 728bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.89933e-72
whxy_7022_l07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 673bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 4.20936e-73
whyd_17012_h19r 2012 3' Spikelet at late flowering 557bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.20599e-54
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