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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 64
First Previous 1-64 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whms_5058_g15f 2012 5' Seed DPA5 of DT3DL CS wheat 677bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 7.0172e-76
whms_5058_g16r 2012 3' Seed DPA5 of DT3DL CS wheat 40bp Contig23558            
whpc_20080_a20f 2012 5' Anther at meiosis 605bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.00808e-107
whpc_20080_a20r 2012 3' Anther at meiosis 717bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 2.22299e-86
whsc_11015_a01f 2012 5' Shoot grown with cold treatment 595bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.69163e-106
whsc_11015_a01r 2012 3' Shoot grown with cold treatment 561bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 157 2.00734e-36
whsd_8022_k07f 2012 5' Shoot grown with dessication 80bp Contig23558            
whsd_4020_n07f 2012 5' Shoot grown with dessication 660bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 2.02207e-112
whsd_4020_n07r 2012 3' Shoot grown with dessication 603bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 2.36942e-60
whsl_10042_d15f 2012 5' Seed DPA30 469bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 1.6762e-80
whsl_10042_d15r 2012 3' Seed DPA30 496bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.62222e-43
whvd_12024_j07r 2012 3' Shoot grown with dessication 658bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.98938e-73
whvh_19007_i01f 2012 5' Shoot with heat shock treatment 738bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 477 1.67997e-132
whvh_19007_i01r 2012 3' Shoot with heat shock treatment 799bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 2.61192e-100
whxa_9038_k11f 2012 5' Root 399bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 2.35596e-66
whxa_9038_k11r 2012 3' Root 624bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 2.39724e-69
whxb_28089_g22f 2012 5' Root 460bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.05064e-18
whxb_28089_g22r 2012 3' Root 432bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 3.07158e-26
whxc_34039_i10f 2012 5' Root, treated at 50 microM Al for 6h 394bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 8.68645e-69
whxd_9015_b02f 2012 5' Root, treated at 50 microM Al for 6h 302bp Contig23558            
whxd_9015_b02r 2012 3' Root, treated at 50 microM Al for 6h 265bp Contig23558            
whxd_36006_l03f 2012 5' Root, treated at 50 microM Al for 6h 162bp Contig23558       hypotheticalproteinSORBIDRAFT_04g008330[Sorghumbicolor] 111 7.11226e-23
whxe_12040_j12f 2012 5' Seedling, infected with leaf rust 588bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 380 1.63568e-103
whxe_12040_j12r 2012 3' Seedling, infected with leaf rust 634bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 6.23095e-73
whxf_16080_a19f 2012 5' Seedling, infected with leaf rust 536bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.0681e-98
whxf_16080_a19r 2012 3' Seedling, infected with leaf rust 626bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.83551e-69
whxf_37008_j03f 2012 5' Seedling, infected with leaf rust 498bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 1.67491e-32
whxf_14022_l08f 2012 5' Seedling, infected with leaf rust 528bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 4.46344e-95
whxf_15022_l08f 2012 5' Seedling, infected with leaf rust 517bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 1.79847e-93
whxf_14022_l08r 2012 3' Seedling, infected with leaf rust 650bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 5.62184e-72
whxg_10007_j02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 58bp Contig23558            
whxg_10007_j02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 51bp Contig23558            
whxh_34022_k08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 586bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 380 2.10181e-103
whxh_34022_k08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 602bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 2.36942e-60
HX019505 whxj_15034_p11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 377bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 2.19439e-64
HX019520 whxj_15034_p11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 180bp Contig23558       PREDICTED:antigenpeptidetransporter2-like[Xenopus(Silurana)tropicalis] 36 3.72544
HX019521 whxj_16034_p11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 61bp Contig23558            
HX019532 whxj_15034_p12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 167bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 1.86572e-23
HX019545 whxj_15034_p12r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 42bp Contig23558            
HX045976 whxm_19039_j10f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 280bp Contig23558       PREDICTED:citratesynthase,glyoxysomal-like[Brachypodiumdistachyon] 196 2.16149e-48
HX045988 whxm_19039_j10r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 304bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00163982
HX106336 whxp_19050_p15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 626bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.64101e-110
HX106363 whxp_19050_p15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 587bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 7.68665e-61
HX142054 whxr_18049_o14f 2012 5' Roots, 18 day old plants were grown hydroponically 819bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 507 2.44461e-141
HX142081 whxr_18049_o14r 2012 3' Roots, 18 day old plants were grown hydroponically 724bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 4.17158e-88
HX142263 whxr_29065_o18f 2012 5' Roots, 18 day old plants were grown hydroponically 733bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.36928e-117
HX142289 whxr_29065_o18r 2012 3' Roots, 18 day old plants were grown hydroponically 796bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 7.99253e-102
HX149439 whxs_5091_e21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 671bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 448 8.835e-124
HX149463 whxs_5091_e21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 714bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 2.53754e-90
HX165128 whxt_2079_b17f 2012 5' Roots, 18 day old plants were grown hydroponically 424bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 3.10482e-18
HX165157 whxt_2079_b17r 2012 3' Roots, 18 day old plants were grown hydroponically 413bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.41658e-23
HX172741 whxt_2074_h20f 2012 5' Roots, 18 day old plants were grown hydroponically 748bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 483 3.17503e-134
HX172768 whxt_2074_h20r 2012 3' Roots, 18 day old plants were grown hydroponically 801bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 8.11939e-102
HX181188 whxt_7065_o17f 2012 5' Roots, 18 day old plants were grown hydroponically 811bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 5.4399e-93
HX181213 whxt_7065_o17r 2012 3' Roots, 18 day old plants were grown hydroponically 780bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 6.72395e-98
HX181646 whxt_15001_p02f 2012 5' Roots, 18 day old plants were grown hydroponically 731bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 474 1.06876e-131
HX181673 whxt_15001_p02r 2012 3' Roots, 18 day old plants were grown hydroponically 799bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 8.11939e-102
HX188226 whxu_3060_e15f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 690bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 447 2.10397e-123
HX188248 whxu_3060_e15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 813bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 3.18178e-101
whxw_7053_k13f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 675bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.68927e-114
whxw_7053_k13r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 813bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 7.57317e-103
whxx_3045_c10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 722bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 4.00165e-83
whxx_8045_d10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 754bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 5.23183e-84
whxx_8045_d10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 738bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 1.87909e-91
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