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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 86
First Previous 1-86 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10071_i17f 2012 5' Callus 732bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.57947e-104
whdl_24067_b23r 2012 3' Crown of seedling 449bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 194 8.35647e-48
whdl_6020_f20r 2012 3' Crown of seedling 64bp Contig22873       40SribosomalproteinS9[Zeamays] 48 0.000815323
whdl_11054_j10r 2012 3' Crown of seedling 587bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 283 2.72125e-74
whdl_9048_p15f 2012 5' Crown of seedling 166bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 104 1.4783e-20
whdl_9048_p15r 2012 3' Crown of seedling 484bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 249 2.80887e-64
whdp_10068_m19f 2012 5' Seed DPA20 522bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 211 7.04526e-53
whdp_10068_m19r 2012 3' Seed DPA20 475bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 227 1.15856e-57
whe_9019_b08r 2012 3' Seed DPA10 532bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 243 1.78973e-62
whe_8043_g03r 2012 3' Seed DPA10 360bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 150 1.37322e-34
whei_11080_b19r 2012 3' Dormant seed with water absorption after breaking 620bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 326 2.48048e-87
whei_7027_e05r 2012 3' Dormant seed with water absorption after breaking 611bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 338 6.04501e-91
whei_17060_e15r 2012 3' Dormant seed with water absorption after breaking 614bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 331 7.49662e-89
whei_15054_k16r 2012 3' Dormant seed with water absorption after breaking 460bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 220 1.40361e-55
whem_18050_p16f 2012 5' Dormant seed with water absorption 507bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 284 6.14908e-75
whem_18050_p16r 2012 3' Dormant seed with water absorption 560bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 307 1.17915e-81
whf_10054_j22r 2012 3' Spike at flowering date 440bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 196 2.15817e-48
whh_16095_o06r 2012 3' Spike at heading date 464bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 243 1.58315e-62
whms_3042_h11r 2012 3' Seed DPA5 of DT3DL CS wheat 622bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 319 4.01515e-85
whms_5070_l19r 2012 3' Seed DPA5 of DT3DL CS wheat 602bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 7.81486e-88
whoh_18089_p17f 2012 5' Pistil at heading date 522bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 323 2.16986e-86
whoh_18089_p17r 2012 3' Pistil at heading date 395bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 165 7.17219e-39
whok_6072_j20f 2012 5' Seed DPA5 665bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 4.528e-104
whok_6072_j20r 2012 3' Seed DPA5 752bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 380 3.8193e-103
whr_22039_j03f 2012 5' Root 565bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 261 1.00498e-67
whr_22039_j03r 2012 3' Root 549bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 255 5.02214e-66
whr_19097_n12r 2012 3' Root 394bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 165 7.17219e-39
whrd_19094_c23r 2012 3' Root of dessiccated seed 637bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.2951e-90
whsc_19027_e05r 2012 3' Shoot grown with cold treatment 371bp Contig22873       40SribosomalproteinS9[Zeamays] 238 6.65959e-61
whsc_19027_e06r 2012 3' Shoot grown with cold treatment 614bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 3.97505e-90
whsc_17055_j14f 2012 5' Shoot grown with cold treatment 56bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 39 0.324627
whsc_7085_l21r 2012 3' Shoot grown with cold treatment 622bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 312 4.84096e-83
whsc_15068_n20r 2012 3' Shoot grown with cold treatment 56bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 40 0.190315
whsl_23065_a11r 2012 3' Seed DPA30 506bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 248 4.90636e-64
whsl_9001_a19r 2012 3' Seed DPA30 438bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 198 5.7038e-49
whsl_6090_d18r 2012 3' Seed DPA30 388bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 196 2.16958e-48
whsl_25085_i06f 2012 5' Seed DPA30 359bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 123 3.06631e-26
whsl_25086_i06r 2012 3' Seed DPA30 313bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 123 3.03748e-26
whsl_20021_i08r 2012 3' Seed DPA30 629bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 296 4.88422e-78
whsl_31077_k17r 2012 3' Seed DPA30 126bp Contig22873            
whsl_10048_p09f 2012 5' Seed DPA30 347bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 129 3.32709e-28
whsl_10048_p09r 2012 3' Seed DPA30 348bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 148 9.03954e-34
whsl_15064_p22r 2012 3' Seed DPA30 588bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 284 9.50366e-75
whsp_12030_d07r 2012 3' 615bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 3.97505e-90
whvh_11053_k13f 2012 5' Shoot with heat shock treatment 750bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.84019e-104
whvh_11053_k13r 2012 3' Shoot with heat shock treatment 754bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 376 3.26185e-102
whvs_20020_n08f 2012 5' Liquid cultured tissue 189bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 125 8.23273e-27
whxa_21031_a06r 2012 3' Root 635bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 326 2.60575e-87
whxa_13079_b17r 2012 3' Root 662bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.80373e-90
whxa_20062_c15r 2012 3' Root 618bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 8.5253e-88
whxa_3043_f10r 2012 3' Root 651bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.57768e-90
whxa_8005_l01r 2012 3' Root 667bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.86025e-90
whxa_25017_p06f 2012 5' Root 816bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 6.90154e-104
whxa_25017_p06r 2012 3' Root 653bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 326 3.67189e-87
whxb_18016_a04f 2012 5' Root 350bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 106 3.00465e-21
whxb_19016_a04f 2012 5' Root 352bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 108 1.02871e-21
whxb_18016_a04r 2012 3' Root 350bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 140 2.45227e-31
whxb_19016_a04r 2012 3' Root 354bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 140 2.44283e-31
whxb_37042_g11r 2012 3' Root 286bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 93 3.46554e-17
whxb_7018_p08r 2012 3' Root 298bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 133 2.97857e-29
whxc_11015_a02r 2012 3' Root, treated at 50 microM Al for 6h 632bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 336 4.23859e-90
whxc_32012_e03f 2012 5' Root, treated at 50 microM Al for 6h 297bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 67 2.0145e-09
whxc_32012_e03r 2012 3' Root, treated at 50 microM Al for 6h 281bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 93 1.9732e-17
whxd_36014_d03f 2012 5' Root, treated at 50 microM Al for 6h 170bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 102 5.5997e-20
whxd_34091_e22f 2012 5' Root, treated at 50 microM Al for 6h 393bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 141 8.49192e-32
whxd_33087_j21r 2012 3' Root, treated at 50 microM Al for 6h 574bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 316 2.07768e-84
whxd_22067_n17r 2012 3' Root, treated at 50 microM Al for 6h 561bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 222 4.98864e-56
whxg_23028_f08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 185bp Contig22873            
HX010916 whxj_20063_b13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 232bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 86 3.21937e-15
HX016845 whxj_12005_l02r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 351bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 163 2.70502e-38
HX020877 whxk_9064_b15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 346bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 138 9.39032e-31
HX029981 whxk_14050_p15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 732bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 379 4.67916e-103
HX044830 whxm_4057_h13f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 334bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 215 4.52209e-54
HX044841 whxm_4057_h13r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 360bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 165 7.0089e-39
HX055302 whxn_31078_d20r 2012 3' Leaves, plant was grown at constant 23 736bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.57947e-104
HX067256 whxn_24052_m15r 2012 3' Leaves, plant was grown at constant 23 126bp Contig22873            
HX075990 whxo_17011_f02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 632bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 331 7.99363e-89
HX119916 whxq_12070_l19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 210bp Contig22873            
HX119943 whxq_12070_l19r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 189bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 44 0.0107923
HX137475 whxr_28069_k18f 2012 5' Roots, 18 day old plants were grown hydroponically 686bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 328 1.07891e-87
HX137501 whxr_28069_k18r 2012 3' Roots, 18 day old plants were grown hydroponically 660bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 351 8.36022e-95
HX182572 whxt_25066_p19r 2012 3' Roots, 18 day old plants were grown hydroponically 742bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 382 5.7359e-104
whxw_10086_l24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 677bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 330 2.74666e-88
whxw_10086_l24r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 655bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 351 8.26069e-95
whyd_11075_g05r 2012 3' Spikelet at late flowering 468bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 209 3.27956e-52
whyd_6022_j14r 2012 3' Spikelet at late flowering 562bp Contig22873       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 282 5.40348e-74
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