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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 136
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_3014_c03f 2012 5' Callus 670bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.9796e-68
whcs_3014_c03r 2012 3' Callus 593bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.70149e-68
whcs_4092_f24f 2012 5' Callus 745bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.12986e-67
whcs_4092_f24r 2012 3' Callus 652bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.50445e-68
whdp_7056_j16f 2012 5' Seed DPA20 585bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.38736e-68
whdp_7056_j16r 2012 3' Seed DPA20 503bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.1787e-56
whe_16005_i01r 2012 3' Seed DPA10 76bp Contig22809            
whe_10030_l02f 2012 5' Seed DPA10 594bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.8062e-68
whe_10062_l10f 2012 5' Seed DPA10 51bp Contig22809       hypotheticalproteinSORBIDRAFT_03g047300[Sorghumbicolor] 39 0.220941
whei_18075_e18f 2012 5' Dormant seed with water absorption after breaking 51bp Contig22809       hypotheticalproteinSORBIDRAFT_03g047300[Sorghumbicolor] 43 0.0162569
whei_20076_e20f 2012 5' Dormant seed with water absorption after breaking 473bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.24446e-68
whei_20076_e20r 2012 3' Dormant seed with water absorption after breaking 444bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 159 3.00484e-37
whem_7060_e15f 2012 5' Dormant seed with water absorption 560bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.68132e-68
whem_7060_e15r 2012 3' Dormant seed with water absorption 48bp Contig22809       pre-mRNAsplicingfactorPRP8[CandidatropicalisMYA-3404] 30 0.521134
whkp_2040_i12f 2012 5' Shoot grown under continuous light 660bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.71188e-68
whkp_2088_i23f 2012 5' Shoot grown under continuous light 307bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.78558e-42
whkv_5032_a08f 2012 5' Shoot grown with continuous light after cold treatment 727bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.07851e-67
whkv_5032_a08r 2012 3' Shoot grown with continuous light after cold treatment 665bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.9193e-68
whok_10027_e06r 2012 3' Seed DPA5 578bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.17793e-68
whpc_16078_c20f 2012 5' Anther at meiosis 711bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.02715e-67
whpc_16078_c20r 2012 3' Anther at meiosis 652bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.50445e-68
whpc_1059_e14f 2012 5' Anther at meiosis 732bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.09905e-67
whpc_1059_e14r 2012 3' Anther at meiosis 705bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.0115e-67
whpc_14020_m07f 2012 5' Anther at meiosis 727bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.07851e-67
whpc_14020_m07r 2012 3' Anther at meiosis 664bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.81559e-68
whr_23041_c21f 2012 5' Root 424bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.63213e-67
whr_23041_c21r 2012 3' Root 532bp Contig22809       Os01g0971500[OryzasativaJaponicaGroup] 207 1.81602e-51
whr_8006_i07r 2012 3' Root 399bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 6.89055e-34
whsc_13090_g23f 2012 5' Shoot grown with cold treatment 532bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.13558e-51
whsc_14033_p10r 2012 3' Shoot grown with cold treatment 627bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.67851e-65
whsc_14081_p21f 2012 5' Shoot grown with cold treatment 57bp Contig22809       PREDICTED:cytochromeb5-like[Brachypodiumdistachyon] 39 0.324627
whsc_14081_p21r 2012 3' Shoot grown with cold treatment 46bp Contig22809            
whsd_8087_i22f 2012 5' Shoot grown with dessication 562bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.78653e-68
whsd_8087_i22r 2012 3' Shoot grown with dessication 559bp Contig22809       Os01g0971500[OryzasativaJaponicaGroup] 220 2.42999e-55
whsh_4064_p10r 2012 3' - 581bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 4.22395e-56
whsl_22014_l07f 2012 5' Seed DPA30 361bp Contig22809       PREDICTED:cytochromeb5-like[Brachypodiumdistachyon] 235 5.53653e-60
whsl_22014_l07r 2012 3' Seed DPA30 444bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 7.90749e-38
whsp_10056_i15f 2012 5' 537bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.20592e-67
whsp_10056_i15r 2012 3' 656bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.60816e-68
whsp_9005_k01r 2012 3' 640bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.0896e-68
whsp_15003_n01f 2012 5' 531bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.02695e-67
whsp_15003_n01r 2012 3' 562bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 3.8904e-56
whv_1620074_g20f 2012 5' Shoot grown under cold condition for 16days 718bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.04769e-67
whv_1620074_g20r 2012 3' Shoot grown under cold condition for 16days 576bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 4.15355e-56
whxa_3032_a07r 2012 3' Root 360bp Contig22809       hypotheticalproteinSORBIDRAFT_03g047300[Sorghumbicolor] 98 6.19275e-19
whxc_3010_h04f 2012 5' Root, treated at 50 microM Al for 6h 602bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.87798e-68
whxc_3010_h04r 2012 3' Root, treated at 50 microM Al for 6h 608bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.4776e-65
whxc_4010_h04r 2012 3' Root, treated at 50 microM Al for 6h 623bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.58625e-65
whxd_2095_a22f 2012 5' Root, treated at 50 microM Al for 6h 615bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.54638e-57
whxd_32058_h15f 2012 5' Root, treated at 50 microM Al for 6h 626bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 7.71167e-68
whxd_32058_h15r 2012 3' Root, treated at 50 microM Al for 6h 574bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 4.89389e-62
whxd_16024_j07f 2012 5' Root, treated at 50 microM Al for 6h 562bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.78653e-68
whxd_16024_j07r 2012 3' Root, treated at 50 microM Al for 6h 663bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 5.7141e-67
whxd_38085_l22f 2012 5' Root, treated at 50 microM Al for 6h 603bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.87798e-68
whxd_38085_l22r 2012 3' Root, treated at 50 microM Al for 6h 583bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.31001e-65
whxd_34036_m12f 2012 5' Root, treated at 50 microM Al for 6h 665bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.9193e-68
whxd_34036_m12r 2012 3' Root, treated at 50 microM Al for 6h 429bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.38141e-34
whxe_11041_h10f 2012 5' Seedling, infected with leaf rust 604bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.98219e-68
whxe_11041_h10r 2012 3' Seedling, infected with leaf rust 738bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.11959e-67
whxe_12041_h10r 2012 3' Seedling, infected with leaf rust 732bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.09905e-67
whxf_31001_o01f 2012 5' Seedling, infected with leaf rust 490bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.27832e-68
whxf_32001_o01f 2012 5' Seedling, infected with leaf rust 491bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 7.26451e-68
whxg_3047_b10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 579bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.17793e-68
whxg_3047_b10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 703bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.0115e-67
whxg_20030_c07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 41bp Contig22809            
whxg_28026_g08f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 667bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 9.02301e-68
whxg_28026_g08r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 615bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.52106e-65
whxg_30001_o01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 458bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 1.97226e-33
whxg_30001_o01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 402bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.2972e-24
whxh_28012_f04f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 611bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 7.19061e-68
whxh_28012_f04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 632bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 6.58486e-67
whxh_30053_l14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 356bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.46266e-60
whxh_22081_p22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 673bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 9.08282e-68
whxh_22081_p22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 713bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.02715e-67
whxh_23081_p22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 164bp Contig22809            
whxh_5082_p23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 432bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.50683e-65
whxh_5082_p23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 460bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 4.36431e-41
HX027019 whxk_11086_k23f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 394bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.7042e-61
HX027035 whxk_11086_k23r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 360bp Contig22809       hypotheticalproteinSORBIDRAFT_03g047300[Sorghumbicolor] 105 5.04627e-21
HX027371 whxk_11038_l11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 70bp Contig22809       PREDICTED:cytochromeb5-like[Brachypodiumdistachyon] 49 0.000293566
HX035894 whxl_15008_j03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 393bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 4.77748e-59
HX035906 whxl_15008_j03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 268bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.0902569
HX035907 whxl_16008_j03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 73bp Contig22809            
HX040386 whxm_19032_a07f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 336bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.90603e-54
HX041310 whxm_18080_b20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 311bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 4.35569e-49
HX041311 whxm_19080_b20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 308bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 4.37177e-49
HX041326 whxm_18080_b20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 692bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 9.7021e-68
HX041327 whxm_19080_b20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 352bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.4889e-12
HX041507 whxm_3014_c03f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 431bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.58651e-67
HX046462 whxm_14021_k05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 341bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 8.19771e-48
HX046478 whxm_14021_k05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 715bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.03742e-67
HX057128 whxn_9027_f05f 2012 5' Leaves, plant was grown at constant 23 639bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 8.82943e-67
HX077340 whxo_25074_g20f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 638bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 7.98589e-68
HX077356 whxo_25074_g20r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 529bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 7.70227e-55
HX084700 whxo_6082_p24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 650bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.40074e-68
HX084701 whxo_7082_p24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 611bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 7.19061e-68
HX084702 whxo_8082_p24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 699bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 9.90853e-68
HX084714 whxo_6082_p24r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 578bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.42425e-64
HX084715 whxo_8082_p24r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 574bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 5.22867e-64
HX117389 whxq_26040_j12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 660bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 8.71188e-68
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