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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 30
First Previous 1-30 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_1092_e23f 2012 5' Seed DPA20 527bp Contig20388       PREDICTED:isocitratedehydrogenase[NAD]catalyticsubunit5,mitochondrial-like[Brachypodiumdistachyon] 355 4.03701e-96
whf_8065_a23f 2012 5' Spike at flowering date 205bp Contig20388       PREDICTED:isocitratedehydrogenase[NAD]catalyticsubunit5,mitochondrial-like[Brachypodiumdistachyon] 141 8.33468e-32
whf_8065_a23r 2012 3' Spike at flowering date 362bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.46484e-28
whh_10038_j03f 2012 5' Spike at heading date 497bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.81677e-69
whpc_1039_i09f 2012 5' Anther at meiosis 716bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.57839e-116
whpc_1039_i09r 2012 3' Anther at meiosis 739bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 387 1.76685e-105
whpc_9071_j18f 2012 5' Anther at meiosis 730bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 2.64469e-114
whpc_9071_j18r 2012 3' Anther at meiosis 742bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.1474e-102
whva_16083_m21f 2012 5' Shoot with ABA treatment 710bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 432 5.76646e-119
whva_16083_m21r 2012 3' Shoot with ABA treatment 801bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 9.26826e-106
whvh_13016_a04f 2012 5' Shoot with heat shock treatment 746bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 437 1.98012e-120
whxa_23078_c20f 2012 5' Root 208bp Contig20388       PREDICTED:isocitratedehydrogenase[NAD]catalyticsubunit5,mitochondrial-like[Brachypodiumdistachyon] 65 7.59103e-09
whxb_4062_d15f 2012 5' Root 258bp Contig20388            
whxb_4062_d15r 2012 3' Root 244bp Contig20388       isocitratedehydrogenase[Hordeumvulgaresubsp.vulgare] 46 0.00364207
whxb_39055_i13r 2012 3' Root 43bp Contig20388            
whxc_34034_o12f 2012 5' Root, treated at 50 microM Al for 6h 273bp Contig20388       PREDICTED:isocitratedehydrogenase[NAD]catalyticsubunit5,mitochondrial-like[Brachypodiumdistachyon] 189 2.67056e-46
whxc_34034_o12r 2012 3' Root, treated at 50 microM Al for 6h 413bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 1.9057e-36
HX030657 whxl_17080_a19f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 312bp Contig20388       isocitratedehydrogenase[Hordeumvulgaresubsp.vulgare] 59 4.12436e-07
HX030673 whxl_17080_a19r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 303bp Contig20388       PREDICTED:isocitratedehydrogenase[NAD]catalyticsubunit5,mitochondrial-like[Brachypodiumdistachyon] 64 9.92538e-09
HX086256 whxp_17016_b03f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 678bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.26703e-109
HX086257 whxp_18016_b03f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 515bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 2.4612e-79
HX086283 whxp_17016_b03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 828bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 4.25069e-109
HX086284 whxp_18016_b03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 488bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.50801e-62
HX116727 whxq_17087_i22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 693bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.79033e-107
HX116751 whxq_17087_i22r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 559bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.77019e-61
HX137098 whxr_17038_k11f 2012 5' Roots, 18 day old plants were grown hydroponically 728bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 483 2.27909e-134
HX137125 whxr_17038_k11r 2012 3' Roots, 18 day old plants were grown hydroponically 785bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 4.5741e-102
HX138280 whxr_15037_l10f 2012 5' Roots, 18 day old plants were grown hydroponically 731bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 1.14718e-117
HX138304 whxr_15037_l10r 2012 3' Roots, 18 day old plants were grown hydroponically 843bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 455 6.81551e-126
whxx_4071_j18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 346bp Contig20388       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.54908e-17
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