Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 62
First Previous 1-62 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_19082_p23r 2012 3' Callus 684bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 1.43567e-100
whdl_18020_f20r 2012 3' Crown of seedling 387bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 148 5.20889e-34
whe_15082_a12f 2012 5' Seed DPA10 554bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 9.56788e-97
whe_15082_a12r 2012 3' Seed DPA10 379bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 178 6.18816e-43
whei_1047_a10f 2012 5' Dormant seed with water absorption after breaking 328bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 162 3.50491e-38
whei_1047_a10r 2012 3' Dormant seed with water absorption after breaking 405bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 187 1.73392e-45
whei_9061_c13f 2012 5' Dormant seed with water absorption after breaking 471bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 1.60543e-83
whei_9061_c13r 2012 3' Dormant seed with water absorption after breaking 572bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.1866e-78
whei_14038_l11f 2012 5' Dormant seed with water absorption after breaking 416bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 8.71393e-74
whei_14038_l11r 2012 3' Dormant seed with water absorption after breaking 347bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 218 5.44608e-55
whei_13004_m03r 2012 3' Dormant seed with water absorption after breaking 507bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 256 1.80165e-66
whem_1093_d21f 2012 5' Dormant seed with water absorption 158bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 109 2.71977e-22
whem_1093_d21r 2012 3' Dormant seed with water absorption 482bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 223 2.15567e-56
whem_15060_e15f 2012 5' Dormant seed with water absorption 579bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 382 3.13631e-104
whem_15060_e15r 2012 3' Dormant seed with water absorption 583bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.73139e-81
whhg_16070_l20f 2012 5' Anther at meiosis of MT4B CS wheat 606bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 398 8.15272e-109
whhg_4050_p16f 2012 5' Anther at meiosis of MT4B CS wheat 372bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 141 1.10794e-31
whkp_19044_f11f 2012 5' Shoot grown under continuous light 183bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 127 1.60477e-27
whkp_17005_l01f 2012 5' Shoot grown under continuous light 661bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 441 1.06028e-121
whkp_17005_l01r 2012 3' Shoot grown under continuous light 584bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 1.46571e-80
whr_7021_f08f 2012 5' Root 365bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 234 9.37036e-60
whr_7020_f08r 2012 3' Root 529bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 271 7.84087e-71
whr_17076_h17r 2012 3' Root 535bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 244 1.40014e-62
whr_21088_n18f 2012 5' Root 531bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 5.04706e-94
whr_21088_n18r 2012 3' Root 484bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 245 4.16273e-63
whsc_1039_j09f 2012 5' Shoot grown with cold treatment 486bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 1.7368e-85
whsd_20078_d20f 2012 5' Shoot grown with dessication 563bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 6.77231e-101
whsd_20078_d20r 2012 3' Shoot grown with dessication 595bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.66021e-82
whsl_2074_d17r 2012 3' Seed DPA30 433bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 178 8.01159e-43
whsl_12012_g19f 2012 5' Seed DPA30 312bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 1.76839e-50
whsl_12012_g19r 2012 3' Seed DPA30 398bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 217 1.2128e-54
whsl_32005_i13f 2012 5' Seed DPA30 429bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 2.73974e-75
whva_3090_d12f 2012 5' Shoot with ABA treatment 625bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 406 2.53171e-111
whva_3090_d12r 2012 3' Shoot with ABA treatment 563bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 258 8.35574e-67
whva_4021_i14f 2012 5' Shoot with ABA treatment 230bp Contig20383       hypotheticalproteinNCLIV_051480[NeosporacaninumLiverpool] 37 1.31312
whva_12068_m19r 2012 3' Shoot with ABA treatment 577bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 9.03324e-80
whvs_12012_e04f 2012 5' Liquid cultured tissue 679bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 448 5.35817e-124
whvs_12012_e04r 2012 3' Liquid cultured tissue 651bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 7.29145e-96
whvs_12060_e15f 2012 5' Liquid cultured tissue 360bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 2.93572e-61
whvs_12060_e15r 2012 3' Liquid cultured tissue 581bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 2.45914e-80
whvs_8002_o03f 2012 5' Liquid cultured tissue 697bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 460 1.45342e-127
whvs_8002_o03r 2012 3' Liquid cultured tissue 684bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.45468e-102
whxb_14015_a02f 2012 5' Root 554bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 361 5.07333e-98
whxb_14015_a02r 2012 3' Root 625bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.41407e-90
whxc_26013_c02f 2012 5' Root, treated at 50 microM Al for 6h 420bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 275 3.76566e-72
whxc_26013_c02r 2012 3' Root, treated at 50 microM Al for 6h 374bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 170 1.3006e-40
whxd_20064_a15r 2012 3' Root, treated at 50 microM Al for 6h 359bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 145 7.53509e-33
whxf_28067_m18f 2012 5' Seedling, infected with leaf rust 519bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 337 1.0911e-90
whxf_28067_m18r 2012 3' Seedling, infected with leaf rust 522bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 264 1.16836e-68
whxg_16007_i02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 557bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 371 4.99681e-101
whxg_16007_i02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 621bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.33991e-90
HX109711 whxq_19061_c13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 132bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 74 1.63269e-11
HX116687 whxq_29087_i21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 603bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 260 2.00119e-67
HX116710 whxq_29087_i21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 544bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 280 1.82932e-73
HX136590 whxr_26005_k01f 2012 5' Roots, 18 day old plants were grown hydroponically 720bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 447 1.77555e-123
HX136614 whxr_26005_k01r 2012 3' Roots, 18 day old plants were grown hydroponically 764bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 465 9.22219e-129
HX168037 whxt_5011_e01f 2012 5' Roots, 18 day old plants were grown hydroponically 723bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 472 3.94635e-131
HX168062 whxt_5011_e01r 2012 3' Roots, 18 day old plants were grown hydroponically 798bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 452 6.82582e-125
HX194370 whxu_18072_j20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 676bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 437 1.22154e-120
HX194393 whxu_18072_j20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 664bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 438 5.32401e-121
HX199358 whxu_22084_n24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 755bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 477 2.31601e-132
HX199386 whxu_22084_n24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 689bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 1.20026e-102
page-top