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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 102
First Previous 1-100 101-102 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_10081_p21f 2012 5' 638bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.81674e-10
whdp_8060_e15r 2012 3' Seed DPA20 377bp Contig20305       predictedprotein[TrichodermareeseiQM6a] 36 4.98014
whei_3096_a23f 2012 5' Dormant seed with water absorption after breaking 129bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 51 0.000113678
whh_10022_j08f 2012 5' Spike at heading date 560bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 4.13815e-10
whh_10022_j08r 2012 3' Spike at heading date 489bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 62 4.97514e-08
whhg_17067_m17f 2012 5' Anther at meiosis of MT4B CS wheat 707bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.44269e-10
whhg_17067_m17r 2012 3' Anther at meiosis of MT4B CS wheat 722bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.70597e-10
whkp_5088_i23f 2012 5' Shoot grown under continuous light 727bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.78078e-10
whkp_5088_i23r 2012 3' Shoot grown under continuous light 701bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.29233e-10
whkp_2018_o08r 2012 3' Shoot grown under continuous light 122bp Contig20305            
whkv_8094_d24f 2012 5' Shoot grown with continuous light after cold treatment 158bp Contig20305            
whkv_8094_d24r 2012 3' Shoot grown with continuous light after cold treatment 180bp Contig20305       putativeFAD-dependentoxidoreductase[StreptomycesroseosporusNRRL11379] 35 6.35464
whms_9095_b22f 2012 5' Seed DPA5 of DT3DL CS wheat 651bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 6.11891e-10
whms_9095_b22r 2012 3' Seed DPA5 of DT3DL CS wheat 593bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 4.88121e-10
whms_8075_e18f 2012 5' Seed DPA5 of DT3DL CS wheat 64bp Contig20305            
whms_3012_f04f 2012 5' Seed DPA5 of DT3DL CS wheat 688bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 6.91644e-10
whms_3012_f04r 2012 3' Seed DPA5 of DT3DL CS wheat 188bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 52 6.78182e-05
whms_17052_m15f 2012 5' Seed DPA5 of DT3DL CS wheat 638bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.81674e-10
whms_17052_m15r 2012 3' Seed DPA5 of DT3DL CS wheat 612bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.31339e-10
whoh_27026_d14r 2012 3' Pistil at heading date 276bp Contig20305            
whoh_19101_p12f 2012 5' Pistil at heading date 159bp Contig20305       unnamedproteinproduct[StreptomycesviolaceusnigerTu4113] 39 0.589592
whoh_19101_p12r 2012 3' Pistil at heading date 250bp Contig20305       xylanase[TeredinibacterturneraeT7901] 36 2.86601
whpc_8049_o13f 2012 5' Anther at meiosis 735bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
whpc_8049_o13r 2012 3' Anther at meiosis 731bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.93042e-10
whpc_5050_p15f 2012 5' Anther at meiosis 706bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.44269e-10
whpc_5050_p15r 2012 3' Anther at meiosis 746bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.30449e-10
whsc_20036_n12f 2012 5' Shoot grown with cold treatment 637bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.7412e-10
whsc_20036_n12r 2012 3' Shoot grown with cold treatment 606bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.16158e-10
whsc_15018_p08f 2012 5' Shoot grown with cold treatment 616bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.38929e-10
whsc_15018_p08r 2012 3' Shoot grown with cold treatment 612bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.31339e-10
whsp_8029_c06f 2012 5' 640bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.81674e-10
whsp_8029_c06r 2012 3' 678bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 6.76608e-10
whsp_19025_g05f 2012 5' 638bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.81674e-10
whsp_1009_h01f 2012 5' 360bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.39837e-08
whsp_1009_h01r 2012 3' 620bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.4652e-10
whsp_4021_l06f 2012 5' 625bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.5411e-10
whsp_4021_l06r 2012 3' 582bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 4.57614e-10
whsp_3020_m07f 2012 5' 624bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.5411e-10
whsp_3020_m07r 2012 3' 599bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.41589e-10
whv3_8004_m04r 2012 3' Shoot grown under cold condition for 3days 293bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 60 1.89235e-07
whva_14043_e10f 2012 5' Shoot with ABA treatment 321bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.51973e-08
whva_14043_e10r 2012 3' Shoot with ABA treatment 694bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.14197e-10
whva_17072_j20f 2012 5' Shoot with ABA treatment 710bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.51787e-10
whva_17072_j20r 2012 3' Shoot with ABA treatment 703bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.36751e-10
whva_18035_m10f 2012 5' Shoot with ABA treatment 606bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.08567e-10
whva_18035_m10r 2012 3' Shoot with ABA treatment 733bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
whva_18083_m21f 2012 5' Shoot with ABA treatment 92bp Contig20305            
whva_18083_m21r 2012 3' Shoot with ABA treatment 326bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 47 0.00126294
whvh_17032_a08f 2012 5' Shoot with heat shock treatment 734bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
whvh_17032_a08r 2012 3' Shoot with heat shock treatment 727bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.8556e-10
whvs_3029_d05f 2012 5' Liquid cultured tissue 693bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.0668e-10
whvs_3029_d05r 2012 3' Liquid cultured tissue 724bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.78078e-10
whxb_27031_a05f 2012 5' Root 633bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.66566e-10
whxb_27031_a05r 2012 3' Root 624bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 68 2.10562e-09
whxb_27054_k15f 2012 5' Root 669bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 6.54054e-10
whxb_27054_k15r 2012 3' Root 615bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.31339e-10
whxb_4033_o10f 2012 5' Root 379bp Contig20305            
whxb_4033_o10r 2012 3' Root 302bp Contig20305            
whxb_7018_p07f 2012 5' Root 504bp Contig20305       unnamedproteinproduct[StreptomycesviolaceusnigerTu4113] 39 0.575664
whxb_7018_p07r 2012 3' Root 180bp Contig20305            
whxc_25070_k19f 2012 5' Root, treated at 50 microM Al for 6h 451bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 3.10434e-10
whxc_26070_k19f 2012 5' Root, treated at 50 microM Al for 6h 334bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.39848e-08
whxc_25070_k19r 2012 3' Root, treated at 50 microM Al for 6h 375bp Contig20305       xylanase[TeredinibacterturneraeT7901] 37 1.71845
whxc_26070_k19r 2012 3' Root, treated at 50 microM Al for 6h 153bp Contig20305            
whxf_3065_p18f 2012 5' Seedling, infected with leaf rust 624bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.5411e-10
whxf_4065_p18f 2012 5' Seedling, infected with leaf rust 44bp Contig20305            
whxf_3065_p18r 2012 3' Seedling, infected with leaf rust 422bp Contig20305       unnamedproteinproduct[Saccharophagusdegradans2-40] 39 0.590739
whxh_7048_b11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 622bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.5411e-10
whxh_18048_b12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 336bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.39848e-08
whxh_18048_b12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 620bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 68 2.07677e-09
whxh_29049_p14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 443bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 66 2.65075e-09
whxh_29049_p14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 614bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.31339e-10
HX012465 whxj_14012_e03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 459bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 66 2.59383e-09
HX012482 whxj_14012_e03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 304bp Contig20305            
HX044633 whxm_15025_h05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 348bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.5234e-08
HX044648 whxm_15025_h05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 729bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.93042e-10
HX093960 whxp_31058_g15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 620bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 5.4652e-10
HX093961 whxp_32058_g15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 242bp Contig20305       unnamedproteinproduct[StreptomycesviolaceusnigerTu4113] 37 2.20957
HX106512 whxp_3065_p18f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 358bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.44838e-08
HX106544 whxp_3065_p18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 575bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 68 1.68097e-09
HX115418 whxq_25073_h17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 229bp Contig20305            
HX115419 whxq_26073_h17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 134bp Contig20305            
HX115443 whxq_25073_h17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 223bp Contig20305            
HX129266 whxr_3093_d22f 2012 5' Roots, 18 day old plants were grown hydroponically 765bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.63641e-10
HX129289 whxr_3093_d22r 2012 3' Roots, 18 day old plants were grown hydroponically 735bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.08005e-10
HX138034 whxr_27021_l05f 2012 5' Roots, 18 day old plants were grown hydroponically 734bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
HX138061 whxr_27021_l05r 2012 3' Roots, 18 day old plants were grown hydroponically 721bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.70597e-10
HX143161 whxr_10049_p13f 2012 5' Roots, 18 day old plants were grown hydroponically 237bp Contig20305       hypotheticalproteinSORBIDRAFT_08g017270[Sorghumbicolor] 62 6.45791e-08
HX143187 whxr_10049_p13r 2012 3' Roots, 18 day old plants were grown hydroponically 363bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 41 0.152645
HX147709 whxs_21045_d10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 735bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
HX147734 whxs_21045_d10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 739bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.15486e-10
HX161770 whxs_7082_o23f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 773bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.85976e-10
HX161796 whxs_7082_o23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 728bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.8556e-10
HX166963 whxt_3014_d04f 2012 5' Roots, 18 day old plants were grown hydroponically 761bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.67857e-10
HX166988 whxt_3014_d04r 2012 3' Roots, 18 day old plants were grown hydroponically 726bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 7.78078e-10
HX169451 whxt_3012_f04f 2012 5' Roots, 18 day old plants were grown hydroponically 775bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.93422e-10
HX169476 whxt_3012_f04r 2012 3' Roots, 18 day old plants were grown hydroponically 737bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.08005e-10
HX173313 whxt_3024_i07f 2012 5' Roots, 18 day old plants were grown hydroponically 764bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.63641e-10
HX173338 whxt_3024_i07r 2012 3' Roots, 18 day old plants were grown hydroponically 734bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.00523e-10
HX184247 whxu_13032_b07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 775bp Contig20305       hypotheticalproteinOsI_37987[OryzasativaIndicaGroup] 69 8.93422e-10
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