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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 16
First Previous 1-16 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_8005_i19f 2012 5' Crown of seedling 295bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.44549e-31
whdl_8005_i19r 2012 3' Crown of seedling 382bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.43907e-31
whh_1063_o16f 2012 5' Spike at heading date 532bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.7263e-31
whh_1063_o16r 2012 3' Spike at heading date 493bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.42971e-31
whxd_28035_m09f 2012 5' Root, treated at 50 microM Al for 6h 195bp Contig2020            
whxd_28035_m09r 2012 3' Root, treated at 50 microM Al for 6h 177bp Contig2020       ProteintransportproteinSEC61gammasubunit[Medicagotruncatula] 68 1.16286e-09
whxd_31065_p18f 2012 5' Root, treated at 50 microM Al for 6h 403bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.44074e-31
whxd_31065_p18r 2012 3' Root, treated at 50 microM Al for 6h 371bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.46824e-31
whxf_27081_p22f 2012 5' Seedling, infected with leaf rust 297bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.44549e-31
whxf_27081_p22r 2012 3' Seedling, infected with leaf rust 339bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.40541e-31
whxh_38008_j04f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 437bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.40753e-31
whxh_38008_j04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 391bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.40018e-31
HX020426 whxk_12096_a23r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 351bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.45227e-31
HX071926 whxo_20015_a01f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 375bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.45852e-31
HX071941 whxo_20015_a01r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 312bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.40116e-31
whxw_1055_i14r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 370bp Contig2020       Os02g0178400[OryzasativaJaponicaGroup] 140 2.46824e-31
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