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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 632
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_26010_d01f 2012 5' Spike at flowering date 48bp Contig20093       chloroplastputativeribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Wolffiaaustraliana] 34 6.66321
whf_26010_d01r 2012 3' Spike at flowering date 441bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 283 1.34242e-74
whf_16075_g11f 2012 5' Spike at flowering date 435bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 299 3.11414e-79
whf_16075_g11r 2012 3' Spike at flowering date 412bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 143 2.18946e-32
whf_1038_i03f 2012 5' Spike at flowering date 587bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 354 9.61153e-96
whf_1038_i03r 2012 3' Spike at flowering date 558bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 262 4.26948e-68
whf_7015_l19f 2012 5' Spike at flowering date 98bp Contig20093       Os12g0291400[OryzasativaJaponicaGroup] 64 1.28207e-08
whf_8014_l19f 2012 5' Spike at flowering date 83bp Contig20093       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 68 1.17685e-09
whf_7014_l19r 2012 3' Spike at flowering date 547bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 260 1.17191e-67
whf_20039_m21r 2012 3' Spike at flowering date 250bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 126 2.74083e-27
whf_1033_n02f 2012 5' Spike at flowering date 650bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 4.14033e-91
whf_1033_n02r 2012 3' Spike at flowering date 536bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 262 3.8041e-68
whf_27040_n09f 2012 5' Spike at flowering date 496bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 1.2676e-88
whf_27040_n09r 2012 3' Spike at flowering date 495bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 218 6.98814e-55
whf_25016_p07f 2012 5' Spike at flowering date 462bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 316 1.43279e-84
whf_25016_p07r 2012 3' Spike at flowering date 494bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 219 2.41286e-55
whh_7073_c05f 2012 5' Spike at heading date 135bp Contig20093            
whh_7076_g23r 2012 3' Spike at heading date 483bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 212 2.91347e-53
whh_7071_m05f 2012 5' Spike at heading date 439bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 186 2.23336e-45
whh_9055_m10f 2012 5' Spike at heading date 420bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 289 1.92146e-76
whkp_8048_b12f 2012 5' Shoot grown under continuous light 498bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 180 1.23639e-43
whkp_8048_b12r 2012 3' Shoot grown under continuous light 479bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 205 4.6725e-51
whkp_12095_b21r 2012 3' Shoot grown under continuous light 555bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 4.29483e-97
whkp_6061_d13f 2012 5' Shoot grown under continuous light 749bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 351 1.88309e-94
whkp_6061_d13r 2012 3' Shoot grown under continuous light 667bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.17299e-83
whkp_19012_e04f 2012 5' Shoot grown under continuous light 740bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.78914e-97
whkp_19012_e04r 2012 3' Shoot grown under continuous light 670bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 1.21104e-88
whkp_15060_f16f 2012 5' Shoot grown under continuous light 675bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 4.4765e-91
whkp_15060_f16r 2012 3' Shoot grown under continuous light 637bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 9.36803e-93
whkp_18076_f20f 2012 5' Shoot grown under continuous light 739bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 356 3.30923e-96
whkp_18076_f20r 2012 3' Shoot grown under continuous light 680bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 7.29234e-97
whkp_19010_g04f 2012 5' Shoot grown under continuous light 773bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 9.54887e-97
whkp_19010_g04r 2012 3' Shoot grown under continuous light 671bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 1.20521e-88
whkp_12058_g16f 2012 5' Shoot grown under continuous light 579bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 225 6.408e-57
whkp_12058_g16r 2012 3' Shoot grown under continuous light 577bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 255 7.55201e-66
whkp_12010_h03f 2012 5' Shoot grown under continuous light 561bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 215 6.0982e-54
whkp_12010_h03r 2012 3' Shoot grown under continuous light 565bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 255 7.20217e-66
whkp_17026_h08f 2012 5' Shoot grown under continuous light 48bp Contig20093            
whkp_13007_j01f 2012 5' Shoot grown under continuous light 364bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 253 1.49254e-65
whkp_13007_j01r 2012 3' Shoot grown under continuous light 602bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 293 2.13313e-77
whkp_8005_k02f 2012 5' Shoot grown under continuous light 737bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.70851e-97
whkp_8005_k02r 2012 3' Shoot grown under continuous light 726bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 354 1.59673e-95
whkp_16086_k23f 2012 5' Shoot grown under continuous light 720bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 6.58071e-94
whkp_16086_k23r 2012 3' Shoot grown under continuous light 677bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 336 3.83265e-90
whkp_7022_l07f 2012 5' Shoot grown under continuous light 342bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 73 3.59738e-11
whkp_7022_l07r 2012 3' Shoot grown under continuous light 305bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 95 6.83258e-18
whkp_20054_l15f 2012 5' Shoot grown under continuous light 733bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.62787e-97
whkp_20054_l15r 2012 3' Shoot grown under continuous light 633bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.13164e-89
whkp_8035_m10f 2012 5' Shoot grown under continuous light 579bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 225 6.408e-57
whkp_8035_m10r 2012 3' Shoot grown under continuous light 555bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 243 2.05234e-62
whkp_8083_m21f 2012 5' Shoot grown under continuous light 119bp Contig20093            
whkp_8083_m21r 2012 3' Shoot grown under continuous light 159bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 113 2.45993e-23
whkp_6002_o03f 2012 5' Shoot grown under continuous light 92bp Contig20093            
whkp_18065_p18f 2012 5' Shoot grown under continuous light 740bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.78914e-97
whkp_18065_p18r 2012 3' Shoot grown under continuous light 690bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.47063e-92
whkv_1093_c21f 2012 5' Shoot grown with continuous light after cold treatment 494bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 6.72138e-90
whkv_1093_c21r 2012 3' Shoot grown with continuous light after cold treatment 669bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 1.20521e-88
whkv_10091_f22f 2012 5' Shoot grown with continuous light after cold treatment 728bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.46661e-97
whkv_10091_f22r 2012 3' Shoot grown with continuous light after cold treatment 680bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 7.29234e-97
whkv_19058_g16f 2012 5' Shoot grown with continuous light after cold treatment 64bp Contig20093            
whkv_10085_l21f 2012 5' Shoot grown with continuous light after cold treatment 623bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 5.97209e-97
whkv_10085_l21r 2012 3' Shoot grown with continuous light after cold treatment 575bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 4.76767e-97
whkv_3084_m23f 2012 5' Shoot grown with continuous light after cold treatment 733bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 355 9.45008e-96
whkv_3084_m23r 2012 3' Shoot grown with continuous light after cold treatment 687bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 7.53542e-97
whkv_19003_n01f 2012 5' Shoot grown with continuous light after cold treatment 740bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.78914e-97
whkv_19003_n01r 2012 3' Shoot grown with continuous light after cold treatment 686bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 4.67998e-91
whkv_7083_n21f 2012 5' Shoot grown with continuous light after cold treatment 734bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 356 3.27859e-96
whkv_7083_n21r 2012 3' Shoot grown with continuous light after cold treatment 668bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.17299e-83
whkv_11065_o17f 2012 5' Shoot grown with continuous light after cold treatment 692bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 356 2.89425e-96
whkv_11065_o17r 2012 3' Shoot grown with continuous light after cold treatment 667bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 7.08334e-97
whpc_1076_e20f 2012 5' Anther at meiosis 730bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.46661e-97
whpc_1076_e20r 2012 3' Anther at meiosis 684bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 4.67998e-91
whpc_12035_n10f 2012 5' Anther at meiosis 725bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 320 3.30534e-85
whpc_12035_n10r 2012 3' Anther at meiosis 689bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 3.74847e-88
whsc_5087_j21f 2012 5' Shoot grown with cold treatment 669bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 5.61247e-94
whsc_5087_j22f 2012 5' Shoot grown with cold treatment 352bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 207 1.2459e-51
whsd_4080_b20f 2012 5' Shoot grown with dessication 460bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 316 1.43279e-84
whsd_4080_b20r 2012 3' Shoot grown with dessication 539bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 312 2.50655e-83
whsd_8061_d13f 2012 5' Shoot grown with dessication 636bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.90285e-94
whsd_8061_d13r 2012 3' Shoot grown with dessication 584bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 312 3.15534e-83
whsd_18004_m03f 2012 5' Shoot grown with dessication 651bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 6.24879e-95
whsd_18004_m03r 2012 3' Shoot grown with dessication 567bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 295 6.28021e-78
whsh_8002_b01r 2012 3' - 158bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 80 1.767e-13
whsh_5086_f12f 2012 5' - 397bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 225 4.47158e-57
whsh_5084_f12r 2012 3' - 378bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 235 5.59326e-60
whsh_2021_i14f 2012 5' - 398bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 227 1.17197e-57
whsh_2021_i14r 2012 3' - 391bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 235 5.48222e-60
whsh_7022_j14r 2012 3' - 78bp Contig20093       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 57 1.59989e-06
whsh_8022_j14r 2012 3' - 95bp Contig20093       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 3.99731e-10
whsh_10006_j19f 2012 5' - 238bp Contig20093       hypotheticalproteinHMPREF0996_02432[Lachnospiraceaebacterium5_1_63FAA] 35 8.42511
whsh_7013_k19r 2012 3' - 67bp Contig20093            
whsh_5071_m11r 2012 3' - 240bp Contig20093            
whsh_15015_o19f 2012 5' - 147bp Contig20093            
whsh_15015_o19r 2012 3' - 136bp Contig20093            
whsh_4080_p17f 2012 5' - 54bp Contig20093       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.306593
whsh_5089_p17f 2012 5' - 42bp Contig20093            
whsh_5080_p17r 2012 3' - 618bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 286 4.78481e-75
whsh_14016_p19r 2012 3' - 210bp Contig20093       hypotheticalproteinHMPREF0996_02432[Lachnospiraceaebacterium5_1_63FAA] 35 8.38458
whv_166031_a05f 2012 5' Shoot grown under cold condition for 16days 743bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.86978e-97
whv_166031_a05r 2012 3' Shoot grown under cold condition for 16days 669bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 6.6452e-87
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