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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 49
First Previous 1-49 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_12018_b02f 2012 5' Seed DPA10 480bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.0568e-55
whe_12019_b02r 2012 3' Seed DPA10 326bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 192 3.17461e-47
whem_2032_a07f 2012 5' Dormant seed with water absorption 405bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.12591e-52
whem_2032_a07r 2012 3' Dormant seed with water absorption 435bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.08517e-55
whf_20020_f02f 2012 5' Spike at flowering date 342bp Contig19690       histoneH4[Zeamays] 150 1.35753e-34
whf_20020_f02r 2012 3' Spike at flowering date 398bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.28605e-55
whms_3094_c24f 2012 5' Seed DPA5 of DT3DL CS wheat 430bp Contig19690       histoneH4[Zeamays] 195 3.72872e-48
whms_3094_c24r 2012 3' Seed DPA5 of DT3DL CS wheat 421bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.8555e-54
whms_15071_i17f 2012 5' Seed DPA5 of DT3DL CS wheat 429bp Contig19690       histoneH4[Zeamays] 204 1.04837e-50
whms_15071_i17r 2012 3' Seed DPA5 of DT3DL CS wheat 417bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.05943e-55
whoh_6003_b01f 2012 5' Pistil at heading date 467bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 3.29415e-52
whoh_6003_b01r 2012 3' Pistil at heading date 394bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.89309e-54
whoh_24073_c11f 2012 5' Pistil at heading date 443bp Contig19690       histoneH4[Zeamays] 204 1.06378e-50
whoh_8077_k11f 2012 5' Pistil at heading date 480bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.0568e-55
whoh_8077_k11r 2012 3' Pistil at heading date 120bp Contig19690       Pinustaedaanonymouslocus0_18315_02genomicsequence 65 7.67723e-09
whpc_1057_h13f 2012 5' Anther at meiosis 484bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.29514e-55
whpc_1057_h13r 2012 3' Anther at meiosis 457bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 3.14065e-55
whr_19060_h10f 2012 5' Root 448bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.73839e-53
whr_20061_h10r 2012 3' Root 318bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 203 1.81195e-50
whsc_2023_i06f 2012 5' Shoot grown with cold treatment 483bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.29514e-55
whsc_2023_i06r 2012 3' Shoot grown with cold treatment 450bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.21775e-55
whsp_9032_a08f 2012 5' 449bp Contig19690       histoneH4[Zeamays] 207 9.53888e-52
whsp_9032_a08r 2012 3' 439bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.08517e-55
whxb_18076_f20f 2012 5' Root 409bp Contig19690       histoneH4[Zeamays] 181 9.47516e-44
whxb_18076_f20r 2012 3' Root 404bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 3.86969e-53
whxc_14018_o08f 2012 5' Root, treated at 50 microM Al for 6h 457bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.11215e-52
whxc_14018_o08r 2012 3' Root, treated at 50 microM Al for 6h 436bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.08517e-55
whxd_29021_l05f 2012 5' Root, treated at 50 microM Al for 6h 368bp Contig19690       histoneH4[Zeamays] 153 2.73462e-35
whxd_29021_l05r 2012 3' Root, treated at 50 microM Al for 6h 372bp Contig19690       PREDICTED:histoneH4replacement-like[Rattusnorvegicus] 196 2.21334e-48
whxd_22065_o17r 2012 3' Root, treated at 50 microM Al for 6h 442bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.29761e-55
whxh_31047_a09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 462bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 3.90849e-53
whxh_31047_a09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 438bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.04632e-55
HX010602 whxj_16015_b01r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 334bp Contig19690       histoneH4[Zeamays] 172 3.36143e-41
HX010603 whxj_17015_b01r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 384bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 207 1.61174e-51
HX010634 whxj_9015_b02r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 352bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 184 8.68158e-45
HX079528 whxo_19055_j13f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 466bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 3.90849e-53
HX079529 whxo_20055_j13f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 476bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.72351e-53
HX079543 whxo_19055_j13r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 442bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.65817e-54
HX079544 whxo_20055_j13r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 442bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 2.9101e-53
HX081655 whxo_6004_m04f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 439bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 3.80071e-53
HX081656 whxo_7004_m04f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 84bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 58 7.11876e-07
HX081674 whxo_6004_m04r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 417bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.66927e-54
HX105710 whxp_24002_p04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 454bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 208 4.26326e-52
HX105735 whxp_24002_p04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 422bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.75002e-53
HX105736 whxp_25002_p04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 224bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.16397e-27
whyd_1012_h19f 2012 5' Spikelet at late flowering 459bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.7158e-53
whyd_22023_j08f 2012 5' Spikelet at late flowering 308bp Contig19690       PREDICTED:histoneH4-like[Glycinemax] 196 2.16969e-48
whyd_12045_k15f 2012 5' Spikelet at late flowering 479bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.09781e-55
whyd_12045_k15r 2012 3' Spikelet at late flowering 402bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.24828e-55
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