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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 16
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_4015_a01r 2012 3' Callus 787bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 4.45605e-105
whdl_10043_d03r 2012 3' Crown of seedling 348bp Contig18913       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunit6-like[Brachypodiumdistachyon] 137 1.22173e-30
whdl_15088_n06r 2012 3' Crown of seedling 531bp Contig18913       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunit6-like[Brachypodiumdistachyon] 225 3.86181e-57
whe_8004_f19r 2012 3' Seed DPA10 475bp Contig18913       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunit6-like[Brachypodiumdistachyon] 252 3.34806e-65
whe_22023_j08r 2012 3' Seed DPA10 575bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.56046e-68
whf_18053_f22r 2012 3' Spike at flowering date 548bp Contig18913       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunit6-like[Brachypodiumdistachyon] 248 6.01877e-64
whhg_15041_h09r 2012 3' Anther at meiosis of MT4B CS wheat 676bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 318 8.17705e-85
whr_18085_f12r 2012 3' Root 571bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.20261e-68
whxb_12076_f20r 2012 3' Root 569bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.43768e-68
whxc_38025_g05r 2012 3' Root, treated at 50 microM Al for 6h 569bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 6.48319e-67
whxd_31073_g17r 2012 3' Root, treated at 50 microM Al for 6h 607bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.23584e-73
whxe_16045_d10r 2012 3' Seedling, infected with leaf rust 569bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.48835e-66
HX028761 whxk_14051_n14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 689bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.68634e-86
HX073543 whxo_13013_c01r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 577bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.56046e-68
HX081195 whxo_9053_l14r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 561bp Contig18913       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunit6-like[Brachypodiumdistachyon] 255 5.31756e-66
HX093798 whxp_5042_g12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 660bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.60286e-77
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