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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 16
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whr_10015_l19r 2012 3' Root 557bp Contig18353       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 136 3.53339e-30
whvs_12031_a06f 2012 5' Liquid cultured tissue 596bp Contig18353       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 163 2.52258e-38
whvs_1078_d20f 2012 5' Liquid cultured tissue 368bp Contig18353       unknown[Lotusjaponicus] 58 7.01892e-07
whxa_5042_g12f 2012 5' Root 489bp Contig18353       glutaminesynthetaseisoform1-1[Secalecereale] 133 1.74924e-29
whxc_1055_i14f 2012 5' Root, treated at 50 microM Al for 6h 347bp Contig18353       surfaceantigenS[Parameciumprimaurelia] 39 0.452809
whxd_2092_f24f 2012 5' Root, treated at 50 microM Al for 6h 360bp Contig18353       surfaceantigenS[Parameciumprimaurelia] 39 0.445866
whxe_36012_f04r 2012 3' Seedling, infected with leaf rust 573bp Contig18353       GI17572[Drosophilamojavensis] 39 0.48177
whxf_11048_b12f 2012 5' Seedling, infected with leaf rust 381bp Contig18353       unknown[Lotusjaponicus] 42 0.0529969
whxf_11048_b12r 2012 3' Seedling, infected with leaf rust 473bp Contig18353       glutaminesynthetaseisoform1-1[Secalecereale] 86 3.19186e-15
whxg_7096_b24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 450bp Contig18353       glutaminesynthetaseisoform1-1[Secalecereale] 74 1.25489e-11
whxg_8096_b24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 436bp Contig18353       unknown[Lotusjaponicus] 63 3.74022e-08
whxg_9096_b24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 437bp Contig18353       unknown[Lotusjaponicus] 68 1.16268e-09
HX040046 whxl_1050_p15r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 340bp Contig18353       surfaceantigenS[Parameciumprimaurelia] 39 0.440771
HX040061 whxl_1050_p16r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 342bp Contig18353       surfaceantigenS[Parameciumprimaurelia] 39 0.454545
HX062343 whxn_40088_i24f 2012 5' Leaves, plant was grown at constant 23℃ 62bp Contig18353            
HX084863 whxp_36016_a03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 654bp Contig18353       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 210 2.93653e-52
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