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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxf_29025_g06f 2012 5' Seedling, infected with leaf rust 51bp Contig18351       hypothetical_protein[Oryzaglaberrima] 35 4.16676
whxf_28025_g06r 2012 3' Seedling, infected with leaf rust 626bp Contig18351       PREDICTED:LOWQUALITYPROTEIN:hydroxymethylglutaryl-CoAlyase,mitochondrial-like[Brachypodiumdistachyon] 302 3.94227e-80
whxf_22020_n08f 2012 5' Seedling, infected with leaf rust 544bp Contig18351       Hydroxymethylglutaryl-CoAlyase,mitochondrialprecursor,putative,expressed[OryzasativaJaponicaGroup] 243 1.89745e-62
whxf_22020_n08r 2012 3' Seedling, infected with leaf rust 397bp Contig18351       PREDICTED:LOWQUALITYPROTEIN:hydroxymethylglutaryl-CoAlyase,mitochondrial-like[Brachypodiumdistachyon] 155 4.35122e-36
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