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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 17
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_9065_n22r 2012 3' Seed DPA10 399bp Contig18205       hypotheticalproteinDDB_G0291996[DictyosteliumdiscoideumAX4] 41 0.119115
whrd_4068_n19f 2012 5' Root of dessiccated seed 486bp Contig18205       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 7.94215e-22
whrd_4068_n19r 2012 3' Root of dessiccated seed 630bp Contig18205       hCG1793893[Homosapiens] 45 0.0150162
whxb_23071_j18f 2012 5' Root 592bp Contig18205       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 1.84628e-25
whxb_23071_j18r 2012 3' Root 630bp Contig18205       ArfGAPwithRhoGAPdomain,ankyrinrepeatandPHdomain1[Musmusculus] 46 0.00516098
HX015244 whxj_19040_i12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 387bp Contig18205       RecName:Full=Arf-GAPwithRho-GAPdomain,ANKrepeatandPHdomain-containingprotein1;AltName:Full=Centaurin-delta-2;Short=Cnt-d2 46 0.00278774
HX015245 whxj_20040_i12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 244bp Contig18205       RecName:Full=Arf-GAPwithRho-GAPdomain,ANKrepeatandPHdomain-containingprotein1;AltName:Full=Centaurin-delta-2;Short=Cnt-d2 42 0.0524111
HX015259 whxj_19040_i12r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 232bp Contig18205            
HX015530 whxj_19088_i23r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 284bp Contig18205       unnamedproteinproduct[SimkanianegevensisZ] 35 6.35431
HX082847 whxo_4052_n16f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 267bp Contig18205            
HX082865 whxo_4052_n16r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 250bp Contig18205            
HX128513 whxr_4030_d07f 2012 5' Roots, 18 day old plants were grown hydroponically 721bp Contig18205       ArfGAPwithRhoGAPdomain,ankyrinrepeatandPHdomain1[Musmusculus] 46 0.00691812
HX128540 whxr_4030_d07r 2012 3' Roots, 18 day old plants were grown hydroponically 704bp Contig18205       ArfGAPwithRhoGAPdomain,ankyrinrepeatandPHdomain1[Musmusculus] 46 0.00667911
whxw_6016_a04f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 746bp Contig18205       predictedprotein[Hordeumvulgaresubsp.vulgare] 380 3.7517e-103
whxw_6016_a04r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 746bp Contig18205       Proteinphosphatase2Aregulatorysubunit[Ectocarpussiliculosus] 46 0.00752854
whxw_4007_i02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 263bp Contig18205            
whxw_1019_m05f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 50bp Contig18205       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 5.44196
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