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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 85
First Previous 1-85 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_26073_c23f 2012 5' Crown of seedling 312bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 61 1.08536e-07
whdl_26073_c23r 2012 3' Crown of seedling 283bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 93 3.35375e-17
whdl_20068_f05f 2012 5' Crown of seedling 509bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 153 1.63706e-35
whdl_19068_f05f 2012 5' Crown of seedling 496bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 155 4.25927e-36
whdl_19068_f05r 2012 3' Crown of seedling 385bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 158 8.58591e-37
whdl_20068_f05r 2012 3' Crown of seedling 55bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 36 2.59546
whdl_9093_k24f 2012 5' Crown of seedling 357bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 160 1.32699e-37
whdl_7023_m14f 2012 5' Crown of seedling 337bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 156 3.24347e-36
whdl_7023_m14r 2012 3' Crown of seedling 387bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 143 2.85821e-32
whdl_20096_p06f 2012 5' Crown of seedling 431bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 163 2.05077e-38
whdp_6045_d10f 2012 5' Seed DPA20 477bp Contig17815       PREDICTED:uncharacterizedproteinLOC100831577[Brachypodiumdistachyon] 129 4.27478e-28
whdp_6045_d10r 2012 3' Seed DPA20 431bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 149 3.06446e-34
whe_8028_h20f 2012 5' Seed DPA10 432bp Contig17815       hypotheticalproteinOsJ_09549[OryzasativaJaponicaGroup] 120 1.99094e-25
whe_8028_h20r 2012 3' Seed DPA10 383bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 158 8.62041e-37
whei_15096_a23f 2012 5' Dormant seed with water absorption after breaking 401bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 148 8.99934e-34
whei_15096_a23r 2012 3' Dormant seed with water absorption after breaking 355bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.40847e-39
whei_6078_d19f 2012 5' Dormant seed with water absorption after breaking 447bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.34614e-29
whei_6078_d19r 2012 3' Dormant seed with water absorption after breaking 417bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 4.0855e-39
whok_18038_k12f 2012 5' Seed DPA5 476bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 163 2.04538e-38
whok_18038_k12r 2012 3' Seed DPA5 427bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.44252e-39
whr_6041_p14f 2012 5' Root 152bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 54 1.78224e-05
whr_6032_p14r 2012 3' Root 268bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 92 4.45867e-17
whsc_8041_h09f 2012 5' Shoot grown with cold treatment 506bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 153 2.80545e-35
whsc_8041_h09r 2012 3' Shoot grown with cold treatment 465bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.4792e-39
whsc_18023_i06f 2012 5' Shoot grown with cold treatment 408bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 154 9.53643e-36
whsc_18023_i06r 2012 3' Shoot grown with cold treatment 376bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.46431e-39
whsl_24074_d11f 2012 5' Seed DPA30 423bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 155 4.3305e-36
whsl_24074_d11r 2012 3' Seed DPA30 321bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 163 2.07796e-38
whsl_7040_n03f 2012 5' Seed DPA30 338bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 55 7.79196e-06
whsp_1016_a03f 2012 5' 489bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 149 3.09462e-34
whsp_1016_a03r 2012 3' 462bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.33501e-39
whsp_14030_d08f 2012 5' 401bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 151 1.06306e-34
whsp_14030_d08r 2012 3' 380bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.42109e-39
whsp_6076_f19f 2012 5' 436bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 161 7.75986e-38
whsp_6076_f19r 2012 3' 383bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.39948e-39
whsp_3024_i08f 2012 5' 491bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 163 2.06153e-38
whsp_3024_i08r 2012 3' 447bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.42908e-39
whsp_2056_j15r 2012 3' 158bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 93 3.44052e-17
whxa_24015_a02f 2012 5' Root 391bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32236e-29
whxa_24015_a02r 2012 3' Root 386bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.37787e-39
whxa_11063_b13f 2012 5' Root 308bp Contig17815       hypotheticalproteinOsI_10164[OryzasativaIndicaGroup] 128 5.55602e-28
whxa_11063_b13r 2012 3' Root 449bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 160 2.28097e-37
whxa_12078_c19r 2012 3' Root 454bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 149 3.06946e-34
whxa_6093_c22f 2012 5' Root 413bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.3228e-29
whxa_6093_c22r 2012 3' Root 434bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.37387e-39
whxa_6045_d09f 2012 5' Root 290bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.35161e-29
whxa_6045_d09r 2012 3' Root 435bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.37387e-39
whxa_18025_g05f 2012 5' Root 481bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32289e-29
whxa_18025_g05r 2012 3' Root 465bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.4792e-39
whxa_14069_l18f 2012 5' Root 346bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.35078e-29
whxa_14069_l18r 2012 3' Root 457bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.38205e-39
whxa_15019_m05f 2012 5' Root 365bp Contig17815       hypotheticalproteinOsJ_09549[OryzasativaJaponicaGroup] 123 3.04243e-26
whxa_15019_m05r 2012 3' Root 345bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 149 3.11876e-34
whxa_13050_p16f 2012 5' Root 289bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.35161e-29
whxa_13050_p16r 2012 3' Root 445bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.47611e-39
whxa_14050_p16r 2012 3' Root 384bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 158 8.62041e-37
whxb_34013_c02f 2012 5' Root 459bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32292e-29
whxb_34013_c02r 2012 3' Root 459bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.35853e-39
whxb_35013_c02r 2012 3' Root 453bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.40556e-39
whxb_35023_i05f 2012 5' Root 416bp Contig17815       hypotheticalproteinOsJ_09549[OryzasativaJaponicaGroup] 127 1.6103e-27
whxb_13087_i22f 2012 5' Root 48bp Contig17815            
whxb_13087_i22r 2012 3' Root 183bp Contig17815       hypotheticalproteinOsJ_09549[OryzasativaJaponicaGroup] 120 2.65695e-25
whxb_38081_o22r 2012 3' Root 391bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.33465e-39
whxc_39005_k01f 2012 5' Root, treated at 50 microM Al for 6h 373bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 153 2.80639e-35
whxc_39005_k01r 2012 3' Root, treated at 50 microM Al for 6h 310bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.33684e-39
whxc_4070_l19f 2012 5' Root, treated at 50 microM Al for 6h 94bp Contig17815            
whxd_10034_o11f 2012 5' Root, treated at 50 microM Al for 6h 408bp Contig17815       hypotheticalproteinOsJ_09549[OryzasativaJaponicaGroup] 111 1.20916e-22
whxd_9034_o11f 2012 5' Root, treated at 50 microM Al for 6h 487bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.34547e-29
whxd_10034_o11r 2012 3' Root, treated at 50 microM Al for 6h 472bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 158 8.632e-37
whxd_9034_o11r 2012 3' Root, treated at 50 microM Al for 6h 471bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.43089e-39
HX039936 whxl_13034_p11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 316bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 153 2.81889e-35
HX039937 whxl_14034_p11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 315bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 153 2.81889e-35
HX039938 whxl_15034_p11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 336bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 163 2.03158e-38
HX039952 whxl_13034_p11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 324bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 81 1.35125e-13
HX039953 whxl_14034_p11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 312bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 79 3.85134e-13
HX039954 whxl_15034_p11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 298bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 71 8.14912e-11
HX078352 whxo_20007_i02f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 498bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32711e-29
HX078368 whxo_20007_i02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 451bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 160 2.28097e-37
HX143760 whxs_14015_a01f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 445bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.34614e-29
HX143786 whxs_14015_a01r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 436bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.37387e-39
HX144372 whxs_30063_a13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 253bp Contig17815       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 65 5.93954e-09
HX159710 whxs_9020_n07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 457bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32292e-29
HX159732 whxs_9020_n07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 455bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.38205e-39
whxy_8006_k03f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 535bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 161 8.94433e-38
whxy_8006_k03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 492bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.42508e-39
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