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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 75
First Previous 1-75 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_24047_l21f 2012 5' Crown of seedling 404bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.19241e-43
whem_6093_d22f 2012 5' Dormant seed with water absorption 436bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.13426e-43
whem_8012_f03f 2012 5' Dormant seed with water absorption 444bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whem_8012_f03r 2012 3' Dormant seed with water absorption 438bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
whh_18093_h24r 2012 3' Spike at heading date 364bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.12587e-43
whh_24007_j07f 2012 5' Spike at heading date 330bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 172 4.42345e-41
whsc_3022_l08f 2012 5' Shoot grown with cold treatment 204bp Contig16516            
whsc_3022_l08r 2012 3' Shoot grown with cold treatment 174bp Contig16516            
whsh_18043_g03r 2012 3' - 275bp Contig16516       metallothionein[Hordeumvulgare] 94 8.92062e-18
whv_163012_e04f 2012 5' Shoot grown under cold condition for 16days 311bp Contig16516       metallothionein[Hordeumvulgare] 89 2.84959e-16
whv_163012_e04r 2012 3' Shoot grown under cold condition for 16days 286bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 106 2.24436e-21
whv3_14076_f20f 2012 5' Shoot grown under cold condition for 3days 473bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.17178e-43
whv3_14076_f20r 2012 3' Shoot grown under cold condition for 3days 238bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 131 8.63812e-29
whva_13083_m21r 2012 3' Shoot with ABA treatment 423bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.21262e-43
whvd_1068_m20f 2012 5' Shoot grown with dessication 68bp Contig16516       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0468686
whxe_12094_c23f 2012 5' Seedling, infected with leaf rust 314bp Contig16516       metallothionein[Hordeumvulgare] 91 9.75775e-17
whxe_12094_c23r 2012 3' Seedling, infected with leaf rust 286bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 106 2.24436e-21
whxf_33075_e17f 2012 5' Seedling, infected with leaf rust 450bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.17043e-43
whxf_22022_l08f 2012 5' Seedling, infected with leaf rust 447bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxf_22022_l08r 2012 3' Seedling, infected with leaf rust 420bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.26486e-43
whxf_21083_m22r 2012 3' Seedling, infected with leaf rust 80bp Contig16516       metallothionein[Hordeumvulgare] 68 1.1803e-09
whxg_23013_c01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 325bp Contig16516       metallothionein[Hordeumvulgare] 94 9.00893e-18
whxg_23013_c01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 292bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 106 2.31085e-21
whxg_5030_d07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 473bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.17178e-43
whxg_5030_d07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 450bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.19728e-43
whxg_28073_h18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 306bp Contig16516       metallothionein[Hordeumvulgare] 83 2.04969e-14
whxg_29073_h18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 305bp Contig16516       metallothionein[Hordeumvulgare] 83 2.05723e-14
whxg_28073_h18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 275bp Contig16516       metallothionein[Hordeumvulgare] 83 2.05654e-14
HX006150 whxi_18072_j19r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 218bp Contig16516       metallothionein[Hordeumvulgare] 93 3.35467e-17
HX053299 whxn_36045_c09f 2012 5' Leaves, plant was grown at constant 23Ž 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX053330 whxn_36045_c09r 2012 3' Leaves, plant was grown at constant 23Ž 443bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.25097e-43
HX055017 whxn_10062_d16f 2012 5' Leaves, plant was grown at constant 23Ž 433bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 92 7.17861e-38
HX055042 whxn_10062_d16r 2012 3' Leaves, plant was grown at constant 23Ž 431bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 92 7.20918e-38
HX059153 whxn_29073_g17f 2012 5' Leaves, plant was grown at constant 23Ž 450bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.17043e-43
HX059185 whxn_29073_g17r 2012 3' Leaves, plant was grown at constant 23Ž 434bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.13426e-43
HX059225 whxn_40073_g18f 2012 5' Leaves, plant was grown at constant 23Ž 459bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.0899e-43
HX059253 whxn_40073_g18r 2012 3' Leaves, plant was grown at constant 23Ž 452bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.17043e-43
HX059367 whxn_10089_g21f 2012 5' Leaves, plant was grown at constant 23Ž 447bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX059392 whxn_10089_g21r 2012 3' Leaves, plant was grown at constant 23Ž 451bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.19728e-43
HX060831 whxn_24089_h22f 2012 5' Leaves, plant was grown at constant 23Ž 469bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 176 2.35575e-42
HX060843 whxn_35089_h22f 2012 5' Leaves, plant was grown at constant 23Ž 394bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 146 2.02122e-33
HX061133 whxn_8008_i03f 2012 5' Leaves, plant was grown at constant 23Ž 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX061163 whxn_8008_i03r 2012 3' Leaves, plant was grown at constant 23Ž 439bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
HX063687 whxn_10088_j24r 2012 3' Leaves, plant was grown at constant 23Ž 418bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.26486e-43
HX063976 whxn_33021_k05r 2012 3' Leaves, plant was grown at constant 23Ž 675bp Contig16516       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 2.17191e-53
HX065482 whxn_21022_l08f 2012 5' Leaves, plant was grown at constant 23Ž 445bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX065517 whxn_21022_l08r 2012 3' Leaves, plant was grown at constant 23Ž 444bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.25097e-43
HX070264 whxn_10066_o20r 2012 3' Leaves, plant was grown at constant 23Ž 56bp Contig16516       metallothionein[Hordeumvulgare] 37 0.944521
HX070376 whxn_28081_o22f 2012 5' Leaves, plant was grown at constant 23Ž 461bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.0899e-43
HX070405 whxn_28081_o22r 2012 3' Leaves, plant was grown at constant 23Ž 453bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.14359e-43
HX107931 whxq_18096_a23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 70bp Contig16516            
HX132682 whxr_1074_g19f 2012 5' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX132707 whxr_1074_g19r 2012 3' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX170115 whxt_20075_f17f 2012 5' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX170144 whxt_20075_f17r 2012 3' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX176124 whxt_19053_k14f 2012 5' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX176145 whxt_19053_k14r 2012 3' Roots, 18 day old plants were grown hydroponically 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
HX185494 whxu_22030_c08f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 469bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.19935e-43
HX185519 whxu_22030_c08r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 440bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
HX187354 whxu_3093_d21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 436bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.10814e-43
HX198831 whxu_11051_n13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 438bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.10814e-43
whxv_6031_b05f 2012 5' Leaves, plant was grown at constant 23Ž 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxv_6031_b05r 2012 3' Leaves, plant was grown at constant 23Ž 445bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxv_9058_h16f 2012 5' Leaves, plant was grown at constant 23Ž 453bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.14359e-43
whxv_9058_h16r 2012 3' Leaves, plant was grown at constant 23Ž 442bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
whxv_7055_j14r 2012 3' Leaves, plant was grown at constant 23Ž 447bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxx_4047_a09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 443bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.25097e-43
whxx_3030_c07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 461bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.0899e-43
whxx_3030_c07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 441bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
whxx_8002_p03f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxx_8002_p03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxy_4095_a21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 446bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whxy_4095_a21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 430bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.1865e-43
whxy_8028_f07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 442bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
whxy_8028_f07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 437bp Contig16516       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.10814e-43
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