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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 100
First Previous 1-100 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_20049_p13f 2012 5' 92bp Contig16102       translationelongationfactor1-alpha,partial[Diaportheneotheicola] 66 3.39398e-09
whcs_4012_e04r 2012 3' Callus 798bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 400 2.35691e-109
whcs_6084_n24r 2012 3' Callus 687bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 315 7.23694e-84
whdl_24019_b20f 2012 5' Crown of seedling 443bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 292 3.8792e-77
whdl_24019_b20r 2012 3' Crown of seedling 502bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 215 4.50869e-54
whdl_23036_e03f 2012 5' Crown of seedling 538bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 339 2.44865e-91
whdl_23036_e03r 2012 3' Crown of seedling 487bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 215 4.61313e-54
whei_1014_c03r 2012 3' Dormant seed with water absorption after breaking 601bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 276 2.69842e-72
whei_20008_i04f 2012 5' Dormant seed with water absorption after breaking 483bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 289 2.51376e-76
whei_20008_i04r 2012 3' Dormant seed with water absorption after breaking 552bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 3.15297e-60
whei_6038_l12f 2012 5' Dormant seed with water absorption after breaking 515bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 353 1.43621e-95
whei_6038_l12r 2012 3' Dormant seed with water absorption after breaking 661bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 299 3.81506e-79
whem_6082_p23r 2012 3' Dormant seed with water absorption 603bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 276 3.57764e-72
whf_17068_f11f 2012 5' Spike at flowering date 408bp Contig16102       elongationfactor1-alpha,partial[Verniciafordii] 280 1.50496e-73
whf_17068_f11r 2012 3' Spike at flowering date 476bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 194 8.28491e-48
whf_22072_n23f 2012 5' Spike at flowering date 464bp Contig16102       elongationfactor1alpha[Arummaculatum] 317 8.6268e-85
whf_22081_n23r 2012 3' Spike at flowering date 457bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 211 6.52004e-53
whh_22052_f16r 2012 3' Spike at heading date 488bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 194 8.38847e-48
whh_14012_h13f 2012 5' Spike at heading date 469bp Contig16102       elongationfactor1alpha[Arummaculatum] 319 2.95192e-85
whh_14013_h13r 2012 3' Spike at heading date 479bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 194 8.24773e-48
whms_6047_a09f 2012 5' Seed DPA5 of DT3DL CS wheat 563bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 363 1.41211e-98
whms_7096_b23f 2012 5' Seed DPA5 of DT3DL CS wheat 547bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 353 2.22069e-95
whms_7096_b23r 2012 3' Seed DPA5 of DT3DL CS wheat 602bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 274 1.0254e-71
whms_7002_p04f 2012 5' Seed DPA5 of DT3DL CS wheat 557bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 379 2.39641e-103
whms_7002_p04r 2012 3' Seed DPA5 of DT3DL CS wheat 605bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 276 3.57764e-72
whms_2065_p17f 2012 5' Seed DPA5 of DT3DL CS wheat 576bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 353 2.61611e-95
whms_2065_p17r 2012 3' Seed DPA5 of DT3DL CS wheat 619bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 278 1.01174e-72
whoh_1037_f09r 2012 3' Pistil at heading date 312bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 130 2.47564e-28
whpc_5049_o14f 2012 5' Anther at meiosis 741bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 484 1.81152e-134
whpc_5049_o14r 2012 3' Anther at meiosis 731bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 345 9.7793e-93
whr_7049_a22r 2012 3' Root 546bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 232 4.46361e-59
whr_7008_n01r 2012 3' Root 443bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 192 3.20296e-47
whrd_5039_i09f 2012 5' Root of dessiccated seed 540bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 351 8.3056e-95
whrd_5039_i09r 2012 3' Root of dessiccated seed 552bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 3.15297e-60
whsc_12040_i11f 2012 5' Shoot grown with cold treatment 580bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 393 2.32055e-107
whsc_12040_i11r 2012 3' Shoot grown with cold treatment 545bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 3.02933e-60
whsl_28085_i12f 2012 5' Seed DPA30 554bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 341 5.43297e-92
whsl_28086_i12r 2012 3' Seed DPA30 503bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 217 1.181e-54
whsl_26030_l20f 2012 5' Seed DPA30 533bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 328 7.21581e-88
whsl_26031_l20r 2012 3' Seed DPA30 334bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 112 5.39157e-23
whsl_29033_n20r 2012 3' Seed DPA30 40bp Contig16102            
whsl_28032_o20r 2012 3' Seed DPA30 552bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 240 2.1835e-61
whsp_6066_p19f 2012 5' 562bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 351 9.47191e-95
whsp_6066_p19r 2012 3' 603bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 276 2.69842e-72
whv3_10091_e21f 2012 5' Shoot grown under cold condition for 3days 654bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 443 2.72456e-122
whvs_17052_m16f 2012 5' Liquid cultured tissue 590bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 400 1.18836e-109
whxa_1041_h10f 2012 5' Root 606bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 411 7.12558e-113
whxa_13008_j04f 2012 5' Root 418bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 279 3.4059e-73
whxa_13008_j04r 2012 3' Root 677bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 278 1.23865e-72
whxa_4052_m16f 2012 5' Root 572bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 379 2.56504e-103
whxa_4052_m16r 2012 3' Root 590bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 261 1.12524e-67
whxa_13081_o22f 2012 5' Root 352bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 238 6.61649e-61
whxa_13081_o22r 2012 3' Root 622bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 279 6.01379e-73
whxb_2077_d18f 2012 5' Root 218bp Contig16102            
whxb_2077_d18r 2012 3' Root 206bp Contig16102            
whxb_33022_k08f 2012 5' Root 632bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 343 2.65488e-92
whxb_33022_k08r 2012 3' Root 590bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 3.87638e-60
whxb_11037_l10f 2012 5' Root 553bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 370 1.09217e-100
whxb_11037_l10r 2012 3' Root 666bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 309 3.73e-82
whxc_12069_l17f 2012 5' Root, treated at 50 microM Al for 6h 611bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 411 5.61873e-113
whxc_12069_l17r 2012 3' Root, treated at 50 microM Al for 6h 646bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 301 1.23409e-79
whxc_21033_p09f 2012 5' Root, treated at 50 microM Al for 6h 594bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 398 7.82496e-109
whxc_21033_p09r 2012 3' Root, treated at 50 microM Al for 6h 204bp Contig16102            
whxd_39079_a17f 2012 5' Root, treated at 50 microM Al for 6h 573bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 392 3.82407e-107
whxd_39079_a17r 2012 3' Root, treated at 50 microM Al for 6h 610bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 274 1.07201e-71
whxe_26076_e19f 2012 5' Seedling, infected with leaf rust 592bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 399 2.6894e-109
whxe_27076_e19f 2012 5' Seedling, infected with leaf rust 565bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 381 5.10191e-104
whxf_40066_o20f 2012 5' Seedling, infected with leaf rust 556bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 377 1.16688e-102
whxg_21096_a23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 483bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 297 8.994e-79
whxg_21096_a23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 292bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 81 1.03596e-13
whxg_25091_f21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 218bp Contig16102            
whxg_13008_i04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 476bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 194 8.28491e-48
whxg_23003_n02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 536bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 2.91946e-60
whxg_24003_n02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 577bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 276 2.42377e-72
whxh_21031_b05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 733bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 348 8.92845e-94
HX012664 whxj_4043_e10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 422bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 135 4.63748e-30
HX012665 whxj_5043_e10f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 85bp Contig16102            
HX012678 whxj_4043_e10r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 423bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 164 1.21756e-38
HX012679 whxj_5043_e10r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 113bp Contig16102            
HX024106 whxk_6057_g13f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 400bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 244 7.09361e-63
HX024118 whxk_6057_g13r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 312bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 78 6.54513e-13
HX040554 whxm_13063_a14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 85bp Contig16102       elongationfactor1-alpha,partial[Verniciafordii] 60 2.44668e-07
HX048996 whxm_10018_o07f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 384bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 256 1.78087e-66
HX049011 whxm_10018_o07r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 307bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 69 5.22445e-10
HX052961 whxn_35014_c03f 2012 5' Leaves, plant was grown at constant 23 761bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 333 5.49632e-89
HX052987 whxn_35014_c03r 2012 3' Leaves, plant was grown at constant 23 723bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 345 9.50253e-93
HX091895 whxp_28012_f04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 574bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 363 1.93565e-98
HX091924 whxp_28012_f04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 555bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 236 3.21479e-60
HX095679 whxp_1089_h21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 646bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 301 1.23409e-79
HX155560 whxs_5087_j22f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 708bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 311 1.12452e-82
HX160078 whxs_23051_n14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 720bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 348 8.59468e-94
HX177809 whxt_19086_l23f 2012 5' Roots, 18 day old plants were grown hydroponically 726bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 462 7.0336e-128
HX177833 whxt_19086_l23r 2012 3' Roots, 18 day old plants were grown hydroponically 714bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 344 2.05528e-92
HX182908 whxu_24016_a03f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 371bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 252 3.41234e-65
HX182927 whxu_24016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 753bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 378 1.11125e-102
whyd_9028_g02f 2012 5' Spikelet at late flowering 542bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 365 4.34441e-99
whyd_9028_g02r 2012 3' Spikelet at late flowering 496bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 211 6.5407e-53
whyd_18054_i10r 2012 3' Spikelet at late flowering 504bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 215 4.4878e-54
whyd_29064_p10f 2012 5' Spikelet at late flowering 475bp Contig16102       putativeelongationfactor1-alpha[Miscanthussinensis] 323 1.55138e-86
whyd_29064_p10r 2012 3' Spikelet at late flowering 490bp Contig16102       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 209 3.27605e-52
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