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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 34
First Previous 1-34 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsh_16065_a05f 2012 5' - 247bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 62 4.89417e-08
whsh_16065_a05r 2012 3' - 222bp Contig1500       chloroplastchlorophylla/bbindingprotein[Brassicanapus] 77 1.50556e-12
whsh_1001_a13f 2012 5' - 66bp Contig1500       unknown[Lotusjaponicus] 49 0.000500749
whsh_18050_b10f 2012 5' - 439bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 3.21749e-52
whsh_15050_b16f 2012 5' - 210bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 48 0.000953927
whsh_15050_b16r 2012 3' - 225bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 78 8.79681e-13
whsh_5074_c05f 2012 5' - 192bp Contig1500       hypotheticalproteinARALYDRAFT_473203[Arabidopsislyratasubsp.lyrata] 36 5.01321
whsh_5073_c05r 2012 3' - 144bp Contig1500       hypotheticalproteinOsJ_02493[OryzasativaJaponicaGroup] 36 3.72639
whsh_3089_c18f 2012 5' - 279bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 101 7.27163e-20
whsh_3089_c18r 2012 3' - 236bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 101 7.35461e-20
whsh_14035_e21f 2012 5' - 191bp Contig1500            
whsh_14035_e21r 2012 3' - 136bp Contig1500       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.74955
whsh_12083_e24r 2012 3' - 262bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 108 7.90739e-22
whsh_7027_g08f 2012 5' - 385bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 172 5.74577e-41
whsh_7027_g08r 2012 3' - 301bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 160 2.27532e-37
whsh_5027_g14f 2012 5' - 284bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 108 7.71375e-22
whsh_5027_g14r 2012 3' - 243bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 111 9.21888e-23
whsh_17053_i22f 2012 5' - 374bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 167 1.87806e-39
whsh_17053_i22r 2012 3' - 341bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 181 7.18154e-44
whsh_18053_i22r 2012 3' - 136bp Contig1500       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.74955
whsh_3086_j12f 2012 5' - 286bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 110 2.0976e-22
whsh_3086_j12r 2012 3' - 249bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 111 9.1557e-23
whsh_1093_k06r 2012 3' - 171bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 59 5.41902e-07
whsh_1061_k16r 2012 3' - 92bp Contig1500            
whsh_17046_l21f 2012 5' - 374bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 115 6.48481e-24
whsh_17046_l21r 2012 3' - 369bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 129 3.23781e-28
whsh_1087_m06r 2012 3' - 441bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 3.89724e-61
whsh_1071_m17r 2012 3' - 428bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 3.85704e-61
whsh_6056_n16r 2012 3' - 113bp Contig1500       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-likeisoform1[Brachypodiumdistachyon] 79 3.95763e-13
whsh_8031_o02f 2012 5' - 376bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 116 2.21998e-24
whsh_8031_o02r 2012 3' - 345bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 129 3.33985e-28
whsh_14015_o19f 2012 5' - 222bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 78 8.85608e-13
whsh_14015_o19r 2012 3' - 223bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 94 1.19017e-17
whsh_18064_p16f 2012 5' - 585bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 126 5.47029e-27
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