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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 545
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_16051_e16f 2012 5' Spike at flowering date 539bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.80049e-73
whf_16051_e16r 2012 3' Spike at flowering date 515bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 3.34188e-60
whf_6068_e23f 2012 5' Spike at flowering date 485bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.07286e-74
whf_7068_e23f 2012 5' Spike at flowering date 69bp Contig1500       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 48 0.000653998
whf_6067_e23r 2012 3' Spike at flowering date 515bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 2.16614e-59
whkp_13048_b12f 2012 5' Shoot grown under continuous light 632bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.93969e-112
whkp_1014_c03f 2012 5' Shoot grown under continuous light 713bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 457 1.27546e-126
whkp_7013_d01f 2012 5' Shoot grown under continuous light 650bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.25784e-112
whkp_8012_e04r 2012 3' Shoot grown under continuous light 296bp Contig1500       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-likeisoform1[Brachypodiumdistachyon] 206 2.7786e-51
whkp_13025_g06f 2012 5' Shoot grown under continuous light 296bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.57778e-46
whkp_13073_g17f 2012 5' Shoot grown under continuous light 64bp Contig1500       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 48 0.000624271
whkp_15090_g24f 2012 5' Shoot grown under continuous light 634bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.93969e-112
whkp_15042_h11f 2012 5' Shoot grown under continuous light 91bp Contig1500       unknown[Lotusjaponicus] 68 6.85887e-10
whkp_18089_h21f 2012 5' Shoot grown under continuous light 657bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.01488e-116
whkp_10056_i16f 2012 5' Shoot grown under continuous light 698bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 459 4.22879e-127
whkp_16040_j12f 2012 5' Shoot grown under continuous light 722bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 465 4.82409e-129
whkp_1072_j20f 2012 5' Shoot grown under continuous light 588bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 2.93382e-100
whkp_7021_l05f 2012 5' Shoot grown under continuous light 709bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 460 1.95754e-127
whkp_14004_n03f 2012 5' Shoot grown under continuous light 276bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 4.37081e-49
whkv_14015_a01f 2012 5' Shoot grown with continuous light after cold treatment 441bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.52545e-73
whkv_1027_f06f 2012 5' Shoot grown with continuous light after cold treatment 276bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.84061e-39
whkv_7076_f19f 2012 5' Shoot grown with continuous light after cold treatment 633bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.99222e-112
whkv_9005_k01f 2012 5' Shoot grown with continuous light after cold treatment 452bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.23182e-75
whkv_3035_m09f 2012 5' Shoot grown with continuous light after cold treatment 634bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.99222e-112
whok_2058_h16f 2012 5' Seed DPA5 710bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 453 2.4171e-125
whok_2058_h16r 2012 3' Seed DPA5 674bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.8039e-93
whok_10087_i22f 2012 5' Seed DPA5 705bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 453 1.81369e-125
whok_10087_i22r 2012 3' Seed DPA5 687bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 6.8155e-98
whok_18004_n03f 2012 5' Seed DPA5 632bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 4.65382e-113
whok_18004_n03r 2012 3' Seed DPA5 677bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 1.76389e-119
whok_17036_n12f 2012 5' Seed DPA5 576bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 2.74754e-100
whok_17036_n12r 2012 3' Seed DPA5 703bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 5.74362e-63
whsd_3017_o05f 2012 5' Shoot grown with dessication 608bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 5.55016e-105
whsh_16065_a05f 2012 5' - 247bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 62 4.89417e-08
whsh_16065_a05r 2012 3' - 222bp Contig1500       chloroplastchlorophylla/bbindingprotein[Brassicanapus] 77 1.50556e-12
whsh_1001_a13f 2012 5' - 66bp Contig1500       unknown[Lotusjaponicus] 49 0.000500749
whsh_18050_b10f 2012 5' - 439bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 3.21749e-52
whsh_15050_b16f 2012 5' - 210bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 48 0.000953927
whsh_15050_b16r 2012 3' - 225bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 78 8.79681e-13
whsh_5074_c05f 2012 5' - 192bp Contig1500       hypotheticalproteinARALYDRAFT_473203[Arabidopsislyratasubsp.lyrata] 36 5.01321
whsh_5073_c05r 2012 3' - 144bp Contig1500       hypotheticalproteinOsJ_02493[OryzasativaJaponicaGroup] 36 3.72639
whsh_3089_c18f 2012 5' - 279bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 101 7.27163e-20
whsh_3089_c18r 2012 3' - 236bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 101 7.35461e-20
whsh_14035_e21f 2012 5' - 191bp Contig1500            
whsh_14035_e21r 2012 3' - 136bp Contig1500       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.74955
whsh_12083_e24r 2012 3' - 262bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 108 7.90739e-22
whsh_7027_g08f 2012 5' - 385bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 172 5.74577e-41
whsh_7027_g08r 2012 3' - 301bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 160 2.27532e-37
whsh_5027_g14f 2012 5' - 284bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 108 7.71375e-22
whsh_5027_g14r 2012 3' - 243bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 111 9.21888e-23
whsh_17053_i22f 2012 5' - 374bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 167 1.87806e-39
whsh_17053_i22r 2012 3' - 341bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 181 7.18154e-44
whsh_18053_i22r 2012 3' - 136bp Contig1500       chlorophylla/bbindingprotein,partial[Loliumperenne] 36 3.74955
whsh_3086_j12f 2012 5' - 286bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 110 2.0976e-22
whsh_3086_j12r 2012 3' - 249bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 111 9.1557e-23
whsh_1093_k06r 2012 3' - 171bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 59 5.41902e-07
whsh_1061_k16r 2012 3' - 92bp Contig1500            
whsh_17046_l21f 2012 5' - 374bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 115 6.48481e-24
whsh_17046_l21r 2012 3' - 369bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 129 3.23781e-28
whsh_1087_m06r 2012 3' - 441bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 3.89724e-61
whsh_1071_m17r 2012 3' - 428bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 3.85704e-61
whsh_6056_n16r 2012 3' - 113bp Contig1500       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-likeisoform1[Brachypodiumdistachyon] 79 3.95763e-13
whsh_8031_o02f 2012 5' - 376bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 116 2.21998e-24
whsh_8031_o02r 2012 3' - 345bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 129 3.33985e-28
whsh_14015_o19f 2012 5' - 222bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 78 8.85608e-13
whsh_14015_o19r 2012 3' - 223bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 94 1.19017e-17
whsh_18064_p16f 2012 5' - 585bp Contig1500       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 126 5.47029e-27
whsp_13039_i09f 2012 5' 555bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 4.67687e-99
whsp_6051_m13f 2012 5' 527bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 7.12599e-93
whsp_6051_m13r 2012 3' 600bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.74374e-77
whv_1612031_a06f 2012 5' Shoot grown under cold condition for 16days 632bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.01652e-112
whv_1617030_c07f 2012 5' Shoot grown under cold condition for 16days 593bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 8.09756e-106
whv_168044_f12f 2012 5' Shoot grown under cold condition for 16days 656bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 423 2.9177e-116
whv_162089_h21f 2012 5' Shoot grown under cold condition for 16days 635bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.05674e-112
whv_1619007_i02f 2012 5' Shoot grown under cold condition for 16days 673bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 1.67396e-106
whv_1618008_i03f 2012 5' Shoot grown under cold condition for 16days 555bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 2.47989e-100
whv_161039_j09f 2012 5' Shoot grown under cold condition for 16days 73bp Contig1500       unknown[Lotusjaponicus] 52 3.78305e-05
whv_1617056_j16f 2012 5' Shoot grown under cold condition for 16days 527bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 7.12599e-93
whv_1617033_o10f 2012 5' Shoot grown under cold condition for 16days 569bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 4.91817e-99
whv_165065_o18f 2012 5' Shoot grown under cold condition for 16days 668bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 1.73259e-119
whv_1617081_o21f 2012 5' Shoot grown under cold condition for 16days 416bp Contig1500       chloroplastlight-harvestingchlorophylla/bbindingprotein[Triticumaestivum] 286 1.58805e-75
whv3_6096_b23f 2012 5' Shoot grown under cold condition for 3days 637bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 4.77792e-113
whv3_16011_f01f 2012 5' Shoot grown under cold condition for 3days 697bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 7.92877e-110
whv3_17059_f14f 2012 5' Shoot grown under cold condition for 3days 576bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 369 2.70097e-100
whv3_3023_i05f 2012 5' Shoot grown under cold condition for 3days 635bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.05674e-112
whv3_12056_i16f 2012 5' Shoot grown under cold condition for 3days 636bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 4.71587e-113
whvd_5096_b24f 2012 5' Shoot grown with dessication 609bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.70093e-107
whvd_7028_e08f 2012 5' Shoot grown with dessication 608bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 405 6.76889e-111
whvd_13037_k10f 2012 5' Shoot grown with dessication 628bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 405 7.46568e-111
whvd_20003_m01f 2012 5' Shoot grown with dessication 634bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.01652e-112
whvd_12068_m19f 2012 5' Shoot grown with dessication 634bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.01652e-112
whvd_3084_m23f 2012 5' Shoot grown with dessication 671bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 432 6.55217e-119
whvd_3065_o18f 2012 5' Shoot grown with dessication 633bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 4.65382e-113
whvd_11001_p02f 2012 5' Shoot grown with dessication 735bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 479 3.35369e-133
whvd_15002_p03f 2012 5' Shoot grown with dessication 711bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 470 1.91075e-130
whvh_20095_b21f 2012 5' Shoot with heat shock treatment 564bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 1.00964e-104
whvh_1094_d23f 2012 5' Shoot with heat shock treatment 715bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.98332e-112
whvh_11094_d23f 2012 5' Shoot with heat shock treatment 712bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 456 3.72905e-126
whvh_7027_e05f 2012 5' Shoot with heat shock treatment 713bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 456 3.71102e-126
whvh_19075_e17f 2012 5' Shoot with heat shock treatment 674bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.52235e-112
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