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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 118
First Previous 1-100 101-118 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_20048_b11r 2012 3' 74bp Contig14643       PREDICTED:60SribosomalproteinL19-2-like[Brachypodiumdistachyon] 55 7.62258e-06
whcs_19027_f05f 2012 5' Callus 686bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.30974e-109
whcs_19027_f05r 2012 3' Callus 720bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 382 5.37089e-104
whcs_8004_m03f 2012 5' Callus 722bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.45925e-109
whcs_8004_m03r 2012 3' Callus 698bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.38678e-98
whcs_12036_m12f 2012 5' Callus 730bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.50175e-109
whcs_12036_m12r 2012 3' Callus 699bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.38678e-98
whcs_16017_p05r 2012 3' Callus 700bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.38678e-98
whdl_22018_b02r 2012 3' Crown of seedling 474bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.37199e-48
whdl_8050_b22r 2012 3' Crown of seedling 432bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.75355e-43
whdl_6004_f01r 2012 3' Crown of seedling 488bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.20749e-48
whdl_22006_j19r 2012 3' Crown of seedling 432bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 8.04571e-43
whe_2096_p24f 2012 5' Seed DPA10 396bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.63156e-67
whe_2096_p24r 2012 3' Seed DPA10 531bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 6.88488e-59
whei_4027_e06r 2012 3' Dormant seed with water absorption after breaking 603bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 8.6604e-79
whei_8076_f19r 2012 3' Dormant seed with water absorption after breaking 592bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 3.2065e-78
whei_10023_j06r 2012 3' Dormant seed with water absorption after breaking 597bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 4.84316e-74
whei_4087_j22f 2012 5' Dormant seed with water absorption after breaking 386bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 2.42524e-23
whei_4087_j22r 2012 3' Dormant seed with water absorption after breaking 366bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 9.10344e-31
whem_14091_e22f 2012 5' Dormant seed with water absorption 411bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 3.473e-38
whem_14091_e22r 2012 3' Dormant seed with water absorption 448bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.43136e-47
whem_7053_l14r 2012 3' Dormant seed with water absorption 595bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 9.80536e-75
whf_6088_n06r 2012 3' Spike at flowering date 481bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.17046e-48
whh_5017_a14f 2012 5' Spike at heading date 541bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.93596e-97
whh_5017_a14r 2012 3' Spike at heading date 360bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.59226e-12
whh_20082_a24r 2012 3' Spike at heading date 49bp Contig14643            
whh_20026_c20r 2012 3' Spike at heading date 327bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 7.81933e-46
whh_20027_d20r 2012 3' Spike at heading date 173bp Contig14643       PREDICTED:60SribosomalproteinL19-2-like[Brachypodiumdistachyon] 111 9.20068e-23
whh_18043_d21r 2012 3' Spike at heading date 263bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 4.50051e-09
whhg_9095_a22f 2012 5' Anther at meiosis of MT4B CS wheat 696bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 1.76635e-109
whhg_9095_a22r 2012 3' Anther at meiosis of MT4B CS wheat 701bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 1.8707e-98
whhg_16064_b15f 2012 5' Anther at meiosis of MT4B CS wheat 640bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 2.93631e-110
whhg_16064_b15r 2012 3' Anther at meiosis of MT4B CS wheat 712bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 1.2906e-102
whhg_8052_n15f 2012 5' Anther at meiosis of MT4B CS wheat 656bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.18732e-109
whkp_4082_o23f 2012 5' Shoot grown under continuous light 635bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 7.12913e-69
whkp_4082_o23r 2012 3' Shoot grown under continuous light 597bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 6.79043e-76
whkv_1046_d12r 2012 3' Shoot grown with continuous light after cold treatment 701bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.6164e-92
whms_20039_i10r 2012 3' Seed DPA5 of DT3DL CS wheat 680bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.68116e-93
whoh_9033_a09r 2012 3' Pistil at heading date 297bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.71637e-14
whok_9063_a14f 2012 5' Seed DPA5 724bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 3.87741e-110
whok_9063_a14r 2012 3' Seed DPA5 724bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 4.54673e-103
whok_4047_b10r 2012 3' Seed DPA5 693bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.89425e-96
whok_18075_f17f 2012 5' Seed DPA5 746bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 4.13839e-110
whok_18075_f17r 2012 3' Seed DPA5 730bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 382 5.47518e-104
whpc_10070_k19f 2012 5' Anther at meiosis 722bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 394 1.36581e-107
whpc_10070_k19r 2012 3' Anther at meiosis 700bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.38678e-98
whr_25040_m09f 2012 5' Root 416bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 5.84498e-70
whr_25040_m09r 2012 3' Root 364bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 2.91963e-53
whr_25041_p08r 2012 3' Root 279bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.61245e-35
whr_5016_p19r 2012 3' Root 342bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 2.8208e-35
whr_13064_p22r 2012 3' Root 477bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.18024e-48
whsc_9064_a15r 2012 3' Shoot grown with cold treatment 642bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 4.72062e-84
whsc_2096_b23f 2012 5' Shoot grown with cold treatment 675bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 398 6.21753e-109
whsc_2096_b23r 2012 3' Shoot grown with cold treatment 566bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 3.23291e-66
whsc_2096_b24f 2012 5' Shoot grown with cold treatment 321bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 3.88621e-53
whsc_2096_b24r 2012 3' Shoot grown with cold treatment 683bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 4.33271e-89
whsc_19053_k14r 2012 3' Shoot grown with cold treatment 580bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.38209e-74
whsl_29041_c03f 2012 5' Seed DPA30 358bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.06154e-14
whsl_29042_c03r 2012 3' Seed DPA30 358bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.12349e-27
whsp_1065_o18f 2012 5' 568bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 6.45393e-99
whsp_1065_o18r 2012 3' 570bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.21012e-74
whsp_1017_p05r 2012 3' 261bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 2.00854e-41
whv_1612034_p11f 2012 5' Shoot grown under cold condition for 16days 508bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 9.57509e-44
whv_1612034_p11r 2012 3' Shoot grown under cold condition for 16days 462bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.42715e-49
whv3_18050_p15f 2012 5' Shoot grown under cold condition for 3days 73bp Contig14643            
whv3_17050_p15r 2012 3' Shoot grown under cold condition for 3days 432bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 4.67328e-75
whvh_20011_e02r 2012 3' Shoot with heat shock treatment 720bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 1.31005e-102
whvh_18067_m18f 2012 5' Shoot with heat shock treatment 600bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 9.61971e-62
whvh_18067_m18r 2012 3' Shoot with heat shock treatment 544bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.26956e-66
whvs_8042_g11r 2012 3' Liquid cultured tissue 718bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 4.92939e-102
whvs_8035_n10r 2012 3' Liquid cultured tissue 448bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.42604e-48
whxa_27015_a02r 2012 3' Root 581bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.43942e-74
whxa_17059_f14f 2012 5' Root 622bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.8107e-69
whxa_17059_f14r 2012 3' Root 602bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.63857e-77
whxa_3088_i23f 2012 5' Root 425bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 6.80543e-74
whxa_3088_i23r 2012 3' Root 584bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 3.16267e-75
whxa_3088_i24r 2012 3' Root 256bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 5.52716e-15
whxa_10049_o14r 2012 3' Root 584bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.20181e-74
whxb_28074_h20r 2012 3' Root 434bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.59624e-43
whxb_21089_h21r 2012 3' Root 631bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 4.27878e-74
whxb_34037_k09f 2012 5' Root 598bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 2.49315e-62
whxb_34037_k09r 2012 3' Root 554bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 2.80977e-64
whxb_17053_l14r 2012 3' Root 450bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.19907e-48
whxb_17050_o16r 2012 3' Root 588bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 8.45926e-76
whxc_39031_a05r 2012 3' Root, treated at 50 microM Al for 6h 107bp Contig14643       PREDICTED:60SribosomalproteinL19-2-like[Brachypodiumdistachyon] 74 9.80672e-12
whxc_28013_d02r 2012 3' Root, treated at 50 microM Al for 6h 388bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 3.37631e-33
whxc_17014_d04f 2012 5' Root, treated at 50 microM Al for 6h 632bp Contig14643       ChainT,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 349 1.70198e-104
whxc_17014_d04r 2012 3' Root, treated at 50 microM Al for 6h 585bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 3.16267e-75
whxc_32010_g04r 2012 3' Root, treated at 50 microM Al for 6h 520bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.89786e-43
whxc_33066_p20r 2012 3' Root, treated at 50 microM Al for 6h 505bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.25887e-64
whxd_36066_p19r 2012 3' Root, treated at 50 microM Al for 6h 499bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.32093e-58
whxe_5075_f17r 2012 3' Seedling, infected with leaf rust 367bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 5.52287e-28
whxf_12066_o20f 2012 5' Seedling, infected with leaf rust 50bp Contig14643       PREDICTED:60SribosomalproteinL19-2-like[Brachypodiumdistachyon] 41 0.0991759
whxh_30084_m23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 587bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 8.45926e-76
HX004816 whxi_15073_h17r 2012 3' Two-week old seedlings(22℃ 16L-8D) 313bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 5.19318e-18
HX004817 whxi_16073_h17r 2012 3' Two-week old seedlings(22℃ 16L-8D) 143bp Contig14643            
HX018471 whxj_17052_n16r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 309bp Contig14643            
HX025760 whxk_14088_i24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 592bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.12263e-75
HX034531 whxl_2089_g22r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 272bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 2.28184e-13
HX034675 whxl_18010_h04r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 279bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.04924e-14
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