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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 29
First Previous 1-29 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_13011_e01f 2012 5' Shoot grown under continuous light 260bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 5.84395e-41
whkp_13011_e01r 2012 3' Shoot grown under continuous light 434bp Contig14512       serine/threonine-proteinkinase,putative[ToxoplasmagondiiVEG] 36 4.91716
whkp_12059_f14f 2012 5' Shoot grown under continuous light 652bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.96515e-56
whkp_12059_f14r 2012 3' Shoot grown under continuous light 741bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 6.46055e-39
whkv_14010_h04f 2012 5' Shoot grown with continuous light after cold treatment 665bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 423 3.02316e-116
whkv_14010_h04r 2012 3' Shoot grown with continuous light after cold treatment 623bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 7.33432e-79
whxd_32054_k16r 2012 3' Root, treated at 50 microM Al for 6h 85bp Contig14512            
whxe_15095_b21r 2012 3' Seedling, infected with leaf rust 584bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 5.87168e-13
whxe_16054_k16r 2012 3' Seedling, infected with leaf rust 520bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.44184e-58
whxe_6038_l12f 2012 5' Seedling, infected with leaf rust 676bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 7.4108e-118
whxe_6038_l12r 2012 3' Seedling, infected with leaf rust 656bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.11906e-83
whxe_12084_n24f 2012 5' Seedling, infected with leaf rust 669bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 422 5.21669e-116
whxe_12084_n24r 2012 3' Seedling, infected with leaf rust 616bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 9.18527e-79
whxf_5074_h20f 2012 5' Seedling, infected with leaf rust 613bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 3.06484e-66
whxf_5074_h20r 2012 3' Seedling, infected with leaf rust 519bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.44184e-58
whxh_8074_h19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 636bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 9.24637e-93
whxh_14052_m15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 584bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 5.87168e-13
whxh_15052_m15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 615bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 5.56413e-15
whxh_4019_n05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 683bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 432 4.01785e-119
whxh_4019_n05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 566bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 2.87185e-14
HX015880 whxj_20055_j13f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 476bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 9.69629e-81
HX015894 whxj_20055_j13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 276bp Contig14512            
HX036326 whxl_10072_j19f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 312bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 6.09198e-43
HX093496 whxp_27026_g07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 519bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 9.27897e-58
HX189865 whxu_4092_f23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 291bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.93665e-13
HX191809 whxu_4058_h15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 292bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.93665e-13
whxw_3031_a06f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 696bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 7.94718e-102
whxw_6061_d13f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 709bp Contig14512       predictedprotein[Hordeumvulgaresubsp.vulgare] 426 3.16416e-117
whxx_4048_a11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 360bp Contig14512       serine/threonine-proteinkinase,putative[ToxoplasmagondiiVEG] 36 3.75979
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