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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 130
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_22046_k03r 2012 3' Spike at flowering date 242bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 79 2.9725e-13
whf_25056_n22f 2012 5' Spike at flowering date 489bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.42093e-71
whf_25056_n22r 2012 3' Spike at flowering date 338bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 172 4.37353e-41
whkp_10012_e03f 2012 5' Shoot grown under continuous light 714bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.37541e-96
whkp_10012_e03r 2012 3' Shoot grown under continuous light 661bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 4.33473e-99
whkp_9035_m09f 2012 5' Shoot grown under continuous light 74bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 52 4.94081e-05
whkv_12047_a10f 2012 5' Shoot grown with continuous light after cold treatment 663bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.67204e-108
whkv_12047_a10r 2012 3' Shoot grown with continuous light after cold treatment 672bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.21652e-98
whkv_10076_e19f 2012 5' Shoot grown with continuous light after cold treatment 663bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.67204e-108
whkv_10076_e19r 2012 3' Shoot grown with continuous light after cold treatment 716bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 400 1.86883e-109
whms_10071_j18f 2012 5' Seed DPA5 of DT3DL CS wheat 554bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 3.18511e-92
whms_10071_j18r 2012 3' Seed DPA5 of DT3DL CS wheat 505bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.27381e-69
whv_1610080_b19f 2012 5' Shoot grown under cold condition for 16days 624bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 1.16282e-100
whv_1610080_b19r 2012 3' Shoot grown under cold condition for 16days 658bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.126e-98
whv_162046_c11f 2012 5' Shoot grown under cold condition for 16days 119bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 77 1.95231e-12
whv_162046_c11r 2012 3' Shoot grown under cold condition for 16days 269bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 170 2.19747e-40
whv_164072_i20f 2012 5' Shoot grown under cold condition for 16days 678bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 2.38951e-108
whv_164072_i20r 2012 3' Shoot grown under cold condition for 16days 706bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 5.19944e-96
whv_164024_j07r 2012 3' Shoot grown under cold condition for 16days 434bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.53982e-53
whv_1616005_l02f 2012 5' Shoot grown under cold condition for 16days 587bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 8.99612e-94
whv_1616005_l02r 2012 3' Shoot grown under cold condition for 16days 504bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.11095e-66
whv_162003_m01f 2012 5' Shoot grown under cold condition for 16days 649bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 4.9756e-105
whv_162003_m01r 2012 3' Shoot grown under cold condition for 16days 681bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 4.42411e-94
whv_164050_o15f 2012 5' Shoot grown under cold condition for 16days 715bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 2.51994e-114
whv_164050_o15r 2012 3' Shoot grown under cold condition for 16days 697bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.39283e-98
whv_1618017_p06r 2012 3' Shoot grown under cold condition for 16days 43bp Contig14131            
whv3_18016_a04f 2012 5' Shoot grown under cold condition for 3days 661bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.66107e-106
whv3_13077_c18f 2012 5' Shoot grown under cold condition for 3days 604bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 9.53088e-94
whv3_13077_c18r 2012 3' Shoot grown under cold condition for 3days 622bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.09343e-82
whv3_7029_d06f 2012 5' Shoot grown under cold condition for 3days 596bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 3.9625e-92
whv3_7029_d06r 2012 3' Shoot grown under cold condition for 3days 505bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.27381e-69
whv3_9093_d22f 2012 5' Shoot grown under cold condition for 3days 613bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 1.8422e-95
whv3_9093_d22r 2012 3' Shoot grown under cold condition for 3days 644bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 4.62019e-87
whv3_1028_f07f 2012 5' Shoot grown under cold condition for 3days 157bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 73 2.16001e-11
whv3_1028_f07r 2012 3' Shoot grown under cold condition for 3days 478bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.24055e-69
whv3_17073_g18f 2012 5' Shoot grown under cold condition for 3days 420bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.30026e-56
whv3_18073_g18r 2012 3' Shoot grown under cold condition for 3days 569bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 5.11317e-80
whv3_5074_h19f 2012 5' Shoot grown under cold condition for 3days 547bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 5.31019e-81
whv3_5074_h19r 2012 3' Shoot grown under cold condition for 3days 267bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 121 6.86281e-26
whv3_2051_m13f 2012 5' Shoot grown under cold condition for 3days 640bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 1.22067e-100
whv3_2051_m13r 2012 3' Shoot grown under cold condition for 3days 592bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.08233e-86
whva_3017_a08f 2012 5' Shoot with ABA treatment 408bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 5.52916e-60
whva_3017_a08r 2012 3' Shoot with ABA treatment 480bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 4.98057e-61
whva_9018_b08f 2012 5' Shoot with ABA treatment 72bp Contig14131       unknown[Lotusjaponicus] 51 8.42775e-05
whva_20029_c06f 2012 5' Shoot with ABA treatment 438bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 4.46887e-70
whva_20029_c06r 2012 3' Shoot with ABA treatment 405bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 3.73076e-64
whva_7010_d07r 2012 3' Shoot with ABA treatment 477bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 5.00302e-61
whva_12077_d17f 2012 5' Shoot with ABA treatment 593bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 3.77895e-87
whva_12077_d17r 2012 3' Shoot with ABA treatment 507bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 3.49166e-70
whva_17012_f04r 2012 3' Shoot with ABA treatment 124bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 81 1.34382e-13
whva_9054_j22f 2012 5' Shoot with ABA treatment 520bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 4.42948e-76
whva_9054_j22r 2012 3' Shoot with ABA treatment 546bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.68596e-74
whva_2093_k18f 2012 5' Shoot with ABA treatment 481bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 1.17738e-70
whva_2093_k18r 2012 3' Shoot with ABA treatment 543bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 4.82564e-82
whva_12085_l22f 2012 5' Shoot with ABA treatment 166bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 2.78796e-19
whva_12085_l22r 2012 3' Shoot with ABA treatment 311bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 163 2.028e-38
whva_16020_n07f 2012 5' Shoot with ABA treatment 738bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 402 5.25882e-110
whva_16020_n07r 2012 3' Shoot with ABA treatment 704bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 383 2.305e-104
whvd_3027_e06f 2012 5' Shoot grown with dessication 668bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 4.00355e-108
whvd_3027_e06r 2012 3' Shoot grown with dessication 392bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 193 1.82925e-47
whvd_11076_e20f 2012 5' Shoot grown with dessication 704bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.92262e-112
whvd_11076_e20r 2012 3' Shoot grown with dessication 557bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.01385e-77
whvd_6011_f02f 2012 5' Shoot grown with dessication 560bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 7.94604e-62
whvd_6011_f02r 2012 3' Shoot grown with dessication 515bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 3.81474e-64
whvd_15075_f18f 2012 5' Shoot grown with dessication 665bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 3.03721e-100
whvd_8010_h03f 2012 5' Shoot grown with dessication 639bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 9.64953e-106
whvd_8010_h03r 2012 3' Shoot grown with dessication 291bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 114 1.44743e-23
whvd_3019_n06f 2012 5' Shoot grown with dessication 699bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 407 1.46017e-111
whvd_3019_n06r 2012 3' Shoot grown with dessication 549bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 2.6568e-75
whvh_9095_a21f 2012 5' Shoot with heat shock treatment 565bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.37543e-93
whvh_10089_h22f 2012 5' Shoot with heat shock treatment 675bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.87429e-108
whvh_10089_h22r 2012 3' Shoot with heat shock treatment 505bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.27381e-69
whvh_6024_j07f 2012 5' Shoot with heat shock treatment 381bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 143 1.68911e-32
whvh_6024_j07r 2012 3' Shoot with heat shock treatment 337bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 161 1.00826e-37
whvh_17005_k01f 2012 5' Shoot with heat shock treatment 720bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 429 3.79403e-118
whvh_17005_k01r 2012 3' Shoot with heat shock treatment 687bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.34246e-98
whxf_28074_g20r 2012 3' Seedling, infected with leaf rust 486bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.27888e-69
whxg_8095_b22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 541bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 318 7.95419e-85
whxg_8095_b22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 481bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.44916e-62
whxg_39094_d23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 406bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.04649e-58
whxg_39094_d23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 583bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 2.25603e-89
whxg_17053_k14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 576bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.64495e-90
whxh_3091_e21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 664bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.11788e-94
whxh_16003_m01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 421bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 2.97817e-61
whxh_16003_m01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 659bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.23651e-97
HX001273 whxi_16014_c03f 2012 5' Two-week old seedlings（22℃ 16L-8D） 343bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 4.05437e-50
HX001286 whxi_16014_c03r 2012 3' Two-week old seedlings（22℃ 16L-8D） 77bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 51 8.77891e-05
HX006795 whxi_10070_k19f 2012 5' Two-week old seedlings（22℃ 16L-8D） 461bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 182 5.50808e-44
HX006809 whxi_10070_k19r 2012 3' Two-week old seedlings（22℃ 16L-8D） 346bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 141 1.10501e-31
HX020611 whxk_9031_b06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 339bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.71188e-53
HX020628 whxk_9031_b06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 228bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 96 4.07681e-18
HX024845 whxk_20058_h15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 407bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.04649e-58
HX024855 whxk_20058_h15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 428bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 1.62049e-59
HX026204 whxk_19071_j17r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 376bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 165 5.46431e-39
HX027144 whxk_10006_l03f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 358bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.99244e-50
HX027157 whxk_10006_l03r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 345bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 139 4.21513e-31
HX046721 whxm_7053_k14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 317bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 143 1.71016e-32
HX047944 whxm_9036_m12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 317bp Contig14131       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 165 5.48865e-39
HX055192 whxn_14078_d19f 2012 5' Leaves, plant was grown at constant 23℃ 454bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 7.47319e-73
HX055221 whxn_14078_d19r 2012 3' Leaves, plant was grown at constant 23℃ 611bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 7.38952e-89
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